Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 3247.74 | 1445 / 1445 | 100% | 29.45 | 183 / 183 |
prostate | 100% | 4718.20 | 245 / 245 | 100% | 86.61 | 502 / 502 |
breast | 100% | 3807.64 | 459 / 459 | 100% | 49.41 | 1117 / 1118 |
lung | 100% | 3671.57 | 578 / 578 | 100% | 26.83 | 1152 / 1155 |
liver | 100% | 4150.63 | 226 / 226 | 100% | 32.83 | 404 / 406 |
pancreas | 100% | 4181.59 | 328 / 328 | 99% | 23.94 | 177 / 178 |
brain | 99% | 3289.82 | 2627 / 2642 | 100% | 26.72 | 704 / 705 |
uterus | 100% | 4490.84 | 170 / 170 | 99% | 22.53 | 455 / 459 |
thymus | 100% | 4262.23 | 653 / 653 | 99% | 21.65 | 599 / 605 |
ovary | 100% | 4254.03 | 180 / 180 | 99% | 17.65 | 425 / 430 |
stomach | 100% | 3981.97 | 359 / 359 | 98% | 23.49 | 281 / 286 |
bladder | 100% | 3958.95 | 21 / 21 | 98% | 19.17 | 493 / 504 |
intestine | 100% | 4013.96 | 966 / 966 | 97% | 22.48 | 511 / 527 |
adrenal gland | 100% | 4024.64 | 258 / 258 | 97% | 23.95 | 223 / 230 |
skin | 100% | 3762.57 | 1809 / 1809 | 96% | 25.36 | 455 / 472 |
kidney | 100% | 2153.15 | 89 / 89 | 95% | 18.78 | 853 / 901 |
adipose | 100% | 4086.73 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 4629.46 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 15.63 | 29 / 29 |
spleen | 100% | 3878.54 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 13.22 | 1 / 1 |
muscle | 100% | 3021.59 | 802 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 19.05 | 44 / 45 |
heart | 97% | 2538.37 | 835 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 94% | 2103.14 | 875 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 81% | 12.29 | 65 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0035459 | Biological process | vesicle cargo loading |
GO_2000402 | Biological process | negative regulation of lymphocyte migration |
GO_0090110 | Biological process | COPII-coated vesicle cargo loading |
GO_0002042 | Biological process | cell migration involved in sprouting angiogenesis |
GO_0007029 | Biological process | endoplasmic reticulum organization |
GO_0007162 | Biological process | negative regulation of cell adhesion |
GO_0042060 | Biological process | wound healing |
GO_0070973 | Biological process | protein localization to endoplasmic reticulum exit site |
GO_0006887 | Biological process | exocytosis |
GO_0002687 | Biological process | positive regulation of leukocyte migration |
GO_0042953 | Biological process | lipoprotein transport |
GO_0030336 | Biological process | negative regulation of cell migration |
GO_0015031 | Biological process | protein transport |
GO_1903038 | Biological process | negative regulation of leukocyte cell-cell adhesion |
GO_0006888 | Biological process | endoplasmic reticulum to Golgi vesicle-mediated transport |
GO_0140052 | Biological process | cellular response to oxidised low-density lipoprotein particle stimulus |
GO_0009306 | Biological process | protein secretion |
GO_0016020 | Cellular component | membrane |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0070971 | Cellular component | endoplasmic reticulum exit site |
GO_0005788 | Cellular component | endoplasmic reticulum lumen |
GO_0043231 | Cellular component | intracellular membrane-bounded organelle |
GO_0038024 | Molecular function | cargo receptor activity |
GO_0005515 | Molecular function | protein binding |
Gene name | MIA3 |
Protein name | Transport and Golgi organization protein 1 homolog (TANGO1) (C219-reactive peptide) (D320) (Melanoma inhibitory activity protein 3) MIA SH3 domain ER export factor 3 |
Synonyms | KIAA0268 UNQ6077/PRO20088 TANGO |
Description | FUNCTION: Plays a role in the transport of cargos that are too large to fit into COPII-coated vesicles and require specific mechanisms to be incorporated into membrane-bound carriers and exported from the endoplasmic reticulum. This protein is required for collagen VII (COL7A1) secretion by loading COL7A1 into transport carriers. It may participate in cargo loading of COL7A1 at endoplasmic reticulum exit sites by binding to COPII coat subunits Sec23/24 and guiding SH3-bound COL7A1 into a growing carrier. Does not play a role in global protein secretion and is apparently specific to COL7A1 cargo loading. However, it may participate in secretion of other proteins in cells that do not secrete COL7A1. It is also specifically required for the secretion of lipoproteins by participating in their export from the endoplasmic reticulum . Required for correct assembly of COPII coat components at endoplasmic reticulum exit sites (ERES) and for the localization of SEC16A and membrane-bound ER-resident complexes consisting of MIA2 and PREB/SEC12 to ERES . . |
Accessions | Q5JRA6 ENST00000344922.10 [Q5JRA6-1] ENST00000354906.7 A0A0A0MRH6 ENST00000340535.11 [Q5JRA6-4] |