Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 3781.71 | 459 / 459 | 100% | 20.16 | 1118 / 1118 |
esophagus | 100% | 3466.62 | 1445 / 1445 | 100% | 12.39 | 183 / 183 |
intestine | 100% | 3778.04 | 966 / 966 | 100% | 17.12 | 527 / 527 |
lung | 100% | 4042.83 | 578 / 578 | 100% | 17.33 | 1155 / 1155 |
ovary | 100% | 5564.29 | 180 / 180 | 100% | 20.16 | 430 / 430 |
prostate | 100% | 3765.22 | 245 / 245 | 100% | 16.57 | 502 / 502 |
stomach | 100% | 2933.69 | 359 / 359 | 100% | 14.81 | 286 / 286 |
brain | 100% | 2722.48 | 2638 / 2642 | 100% | 20.25 | 705 / 705 |
thymus | 100% | 4063.74 | 653 / 653 | 100% | 19.77 | 604 / 605 |
bladder | 100% | 3807.76 | 21 / 21 | 100% | 16.48 | 503 / 504 |
uterus | 100% | 5222.34 | 170 / 170 | 100% | 17.22 | 458 / 459 |
kidney | 100% | 2698.72 | 89 / 89 | 99% | 13.26 | 895 / 901 |
skin | 100% | 3562.43 | 1809 / 1809 | 99% | 16.69 | 467 / 472 |
pancreas | 100% | 1747.62 | 327 / 328 | 99% | 14.22 | 176 / 178 |
adrenal gland | 100% | 2374.11 | 258 / 258 | 98% | 10.17 | 226 / 230 |
liver | 100% | 1460.89 | 226 / 226 | 95% | 7.63 | 384 / 406 |
adipose | 100% | 3213.70 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 3264.92 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 23.33 | 29 / 29 |
spleen | 100% | 4241.35 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 15.28 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 7.32 | 1 / 1 |
muscle | 100% | 3557.08 | 802 / 803 | 0% | 0 | 0 / 0 |
heart | 99% | 1749.58 | 853 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 98% | 3465.60 | 913 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 96% | 12.53 | 77 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0051123 | Biological process | RNA polymerase II preinitiation complex assembly |
GO_0060261 | Biological process | positive regulation of transcription initiation by RNA polymerase II |
GO_0051151 | Biological process | negative regulation of smooth muscle cell differentiation |
GO_0032968 | Biological process | positive regulation of transcription elongation by RNA polymerase II |
GO_0035019 | Biological process | somatic stem cell population maintenance |
GO_0016592 | Cellular component | mediator complex |
GO_0005654 | Cellular component | nucleoplasm |
GO_0030864 | Cellular component | cortical actin cytoskeleton |
GO_0070847 | Cellular component | core mediator complex |
GO_0016020 | Cellular component | membrane |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
GO_0003779 | Molecular function | actin binding |
Gene name | MED28 |
Protein name | Mediator of RNA polymerase II transcription subunit 28 (Endothelial-derived protein 1) (Mediator complex subunit 28) (Merlin and Grb2-interacting cytoskeletal protein) (Magicin) (Tumor angiogenesis marker EG-1) Mediator of RNA polymerase II transcription subunit 28 (Mediator complex subunit 28) |
Synonyms | FKSG20 EG1 |
Description | FUNCTION: Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. May be part of a complex containing NF2/merlin that participates in cellular signaling to the actin cytoskeleton downstream of tyrosine kinase signaling pathways. . |
Accessions | ENST00000503945.2 Q9H204 ENST00000237380.12 H0YAA8 |