GIMAP7 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
natural killer cell	41 studies	47% ± 17%	Explore
CD8-positive, alpha-beta T cell	35 studies	45% ± 16%	Explore
endothelial cell	34 studies	45% ± 18%	Explore
T cell	33 studies	38% ± 17%	Explore
CD4-positive, alpha-beta T cell	33 studies	48% ± 18%	Explore
regulatory T cell	24 studies	39% ± 13%	Explore
mature NK T cell	22 studies	44% ± 15%	Explore
endothelial cell of lymphatic vessel	20 studies	42% ± 16%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	19 studies	58% ± 19%	Explore
gamma-delta T cell	18 studies	39% ± 13%	Explore
mucosal invariant T cell	16 studies	40% ± 13%	Explore
CD16-negative, CD56-bright natural killer cell, human	15 studies	41% ± 19%	Explore
capillary endothelial cell	15 studies	45% ± 10%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	14 studies	59% ± 13%	Explore
CD16-positive, CD56-dim natural killer cell, human	14 studies	51% ± 15%	Explore
classical monocyte	13 studies	29% ± 10%	Explore
vein endothelial cell	13 studies	43% ± 14%	Explore
CD4-positive, alpha-beta memory T cell	12 studies	44% ± 16%	Explore
CD8-positive, alpha-beta memory T cell	12 studies	45% ± 12%	Explore
non-classical monocyte	12 studies	33% ± 8%	Explore
endothelial cell of artery	12 studies	52% ± 14%	Explore
effector memory CD8-positive, alpha-beta T cell	11 studies	49% ± 14%	Explore
endothelial cell of vascular tree	11 studies	39% ± 16%	Explore
T follicular helper cell	8 studies	45% ± 12%	Explore
monocyte	7 studies	24% ± 5%	Explore
effector CD8-positive, alpha-beta T cell	7 studies	50% ± 18%	Explore
macrophage	7 studies	25% ± 6%	Explore
effector memory CD4-positive, alpha-beta T cell	6 studies	57% ± 17%	Explore
CD4-positive helper T cell	5 studies	37% ± 8%	Explore
exhausted T cell	5 studies	63% ± 11%	Explore
effector CD4-positive, alpha-beta T cell	5 studies	59% ± 18%	Explore
lymphocyte	5 studies	28% ± 9%	Explore
T-helper 17 cell	5 studies	39% ± 14%	Explore
CD4-positive, alpha-beta cytotoxic T cell	4 studies	33% ± 17%	Explore
central memory CD8-positive, alpha-beta T cell	4 studies	52% ± 20%	Explore
leukocyte	4 studies	33% ± 11%	Explore
glomerular endothelial cell	4 studies	65% ± 12%	Explore
innate lymphoid cell	4 studies	38% ± 15%	Explore
effector memory CD8-positive, alpha-beta T cell, terminally differentiated	4 studies	52% ± 14%	Explore
double negative thymocyte	4 studies	47% ± 18%	Explore
intraepithelial lymphocyte	3 studies	46% ± 22%	Explore
central memory CD4-positive, alpha-beta T cell	3 studies	66% ± 6%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
peripheral blood	20 studies	37% ± 13%	Explore
lung	6 studies	22% ± 4%	Explore
bone marrow	3 studies	28% ± 9%	Explore
lymph node	3 studies	35% ± 6%	Explore
liver	3 studies	31% ± 10%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
thymus	100%	1673.48	653 / 653	99%	52.43	597 / 605
breast	100%	2095.46	459 / 459	94%	35.61	1049 / 1118
lung	100%	2248.44	578 / 578	90%	28.91	1039 / 1155
kidney	100%	849.72	89 / 89	90%	72.00	808 / 901
prostate	91%	626.00	223 / 245	90%	18.60	450 / 502
adrenal gland	93%	638.31	241 / 258	84%	27.50	193 / 230
uterus	99%	1353.15	169 / 170	72%	17.15	329 / 459
bladder	100%	844.48	21 / 21	71%	15.62	357 / 504
intestine	98%	1148.33	945 / 966	72%	15.46	378 / 527
stomach	89%	603.75	321 / 359	78%	18.99	224 / 286
brain	70%	384.97	1861 / 2642	95%	22.54	671 / 705
esophagus	92%	830.52	1324 / 1445	61%	11.86	111 / 183
pancreas	46%	161.65	150 / 328	87%	29.79	155 / 178
liver	43%	183.85	97 / 226	85%	20.18	346 / 406
skin	52%	259.68	941 / 1809	74%	31.47	350 / 472
ovary	49%	250.74	89 / 180	51%	7.46	221 / 430
adipose	100%	2276.78	1204 / 1204	0%	0	0 / 0
spleen	100%	4742.97	241 / 241	0%	0	0 / 0
ureter	0%	0	0 / 0	100%	7.81	1 / 1
heart	97%	949.87	833 / 861	0%	0	0 / 0
lymph node	0%	0	0 / 0	97%	123.30	28 / 29
peripheral blood	85%	1173.87	793 / 929	0%	0	0 / 0
tonsil	0%	0	0 / 0	84%	31.98	38 / 45
muscle	81%	401.34	652 / 803	0%	0	0 / 0
blood vessel	80%	666.23	1065 / 1335	0%	0	0 / 0
eye	0%	0	0 / 0	24%	5.11	19 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0