Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
bladder | 100% | 10507.14 | 21 / 21 | 98% | 62.26 | 492 / 504 |
breast | 100% | 9080.81 | 458 / 459 | 97% | 56.30 | 1090 / 1118 |
lung | 100% | 11820.60 | 577 / 578 | 97% | 43.22 | 1124 / 1155 |
intestine | 100% | 9958.35 | 966 / 966 | 93% | 34.13 | 492 / 527 |
esophagus | 100% | 8958.68 | 1442 / 1445 | 93% | 34.61 | 170 / 183 |
uterus | 100% | 10420.01 | 170 / 170 | 91% | 72.25 | 416 / 459 |
prostate | 99% | 7930.18 | 243 / 245 | 87% | 25.00 | 438 / 502 |
ovary | 100% | 7198.26 | 180 / 180 | 79% | 20.39 | 338 / 430 |
stomach | 84% | 5158.66 | 302 / 359 | 93% | 34.98 | 265 / 286 |
kidney | 80% | 3367.89 | 71 / 89 | 93% | 53.74 | 842 / 901 |
thymus | 87% | 3072.72 | 570 / 653 | 80% | 37.08 | 485 / 605 |
skin | 81% | 4878.72 | 1472 / 1809 | 84% | 53.90 | 397 / 472 |
liver | 73% | 2357.94 | 164 / 226 | 92% | 39.65 | 373 / 406 |
adrenal gland | 99% | 11650.56 | 255 / 258 | 46% | 13.37 | 106 / 230 |
pancreas | 12% | 247.05 | 38 / 328 | 95% | 53.62 | 169 / 178 |
spleen | 100% | 7598.74 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 18.42 | 1 / 1 |
blood vessel | 100% | 8564.06 | 1334 / 1335 | 0% | 0 | 0 / 0 |
adipose | 100% | 8303.64 | 1203 / 1204 | 0% | 0 | 0 / 0 |
peripheral blood | 99% | 16252.90 | 917 / 929 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 60.12 | 44 / 45 |
lymph node | 0% | 0 | 0 / 0 | 97% | 90.40 | 28 / 29 |
muscle | 90% | 3777.72 | 722 / 803 | 0% | 0 | 0 / 0 |
brain | 11% | 413.04 | 285 / 2642 | 65% | 27.23 | 457 / 705 |
heart | 55% | 1370.25 | 474 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 18% | 11.71 | 14 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0051715 | Biological process | cytolysis in another organism |
GO_0140639 | Biological process | positive regulation of pyroptotic inflammatory response |
GO_0140973 | Biological process | positive regulation of AIM2 inflammasome complex assembly |
GO_0042832 | Biological process | defense response to protozoan |
GO_0051607 | Biological process | defense response to virus |
GO_0071347 | Biological process | cellular response to interleukin-1 |
GO_0006955 | Biological process | immune response |
GO_0071356 | Biological process | cellular response to tumor necrosis factor |
GO_0050830 | Biological process | defense response to Gram-positive bacterium |
GO_0034504 | Biological process | protein localization to nucleus |
GO_0042742 | Biological process | defense response to bacterium |
GO_0002218 | Biological process | activation of innate immune response |
GO_0071222 | Biological process | cellular response to lipopolysaccharide |
GO_0071346 | Biological process | cellular response to type II interferon |
GO_0031410 | Cellular component | cytoplasmic vesicle |
GO_0048471 | Cellular component | perinuclear region of cytoplasm |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0000139 | Cellular component | Golgi membrane |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0030659 | Cellular component | cytoplasmic vesicle membrane |
GO_0005634 | Cellular component | nucleus |
GO_0042803 | Molecular function | protein homodimerization activity |
GO_0004866 | Molecular function | endopeptidase inhibitor activity |
GO_0042802 | Molecular function | identical protein binding |
GO_0005525 | Molecular function | GTP binding |
GO_0005515 | Molecular function | protein binding |
GO_0140678 | Molecular function | molecular function inhibitor activity |
GO_0003924 | Molecular function | GTPase activity |
Gene name | GBP2 |
Protein name | Guanylate-binding protein 2 GBP2 protein Guanylate-binding protein 2 (EC 3.6.5.-) (GTP-binding protein 2) (GBP-2) (HuGBP-2) (Guanine nucleotide-binding protein 2) (Interferon-induced guanylate-binding protein 2) |
Synonyms | |
Description | FUNCTION: Interferon (IFN)-inducible GTPase that plays important roles in innate immunity against a diverse range of bacterial, viral and protozoan pathogens . Hydrolyzes GTP to GMP in 2 consecutive cleavage reactions, but the major reaction product is GDP . Following infection, recruited to the pathogen-containing vacuoles or vacuole-escaped bacteria and acts as a positive regulator of inflammasome assembly by promoting the release of inflammasome ligands from bacteria (By similarity). Acts by promoting lysis of pathogen-containing vacuoles, releasing pathogens into the cytosol (By similarity). Following pathogen release in the cytosol, promotes recruitment of proteins that mediate bacterial cytolysis: this liberates ligands that are detected by inflammasomes, such as lipopolysaccharide (LPS) that activates the non-canonical CASP4/CASP11 inflammasome or double-stranded DNA (dsDNA) that activates the AIM2 inflammasome (By similarity). Confers protection to the protozoan pathogen Toxoplasma gondii (By similarity). Independently of its GTPase activity, acts as an inhibitor of various viruses infectivity, such as HIV-1, Zika and influenza A viruses, by inhibiting FURIN-mediated maturation of viral envelope proteins . . |
Accessions | ENST00000370466.4 P32456 A0A348GSI7 Q8TCE5 ENST00000464839.5 |