FLOT2 report

Query

Invalid input gene. Please select from the suggestions.

I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
B cell	16 studies	22% ± 6%	Explore
memory B cell	12 studies	23% ± 4%	Explore
classical monocyte	11 studies	26% ± 9%	Explore
endothelial cell	11 studies	21% ± 5%	Explore
naive B cell	11 studies	24% ± 5%	Explore
regulatory T cell	11 studies	21% ± 4%	Explore
CD16-positive, CD56-dim natural killer cell, human	10 studies	22% ± 5%	Explore
natural killer cell	10 studies	22% ± 5%	Explore
conventional dendritic cell	7 studies	28% ± 14%	Explore
CD4-positive, alpha-beta memory T cell	7 studies	18% ± 2%	Explore
basal cell	7 studies	20% ± 5%	Explore
non-classical monocyte	7 studies	25% ± 8%	Explore
dendritic cell	7 studies	27% ± 13%	Explore
mucosal invariant T cell	7 studies	18% ± 2%	Explore
CD16-negative, CD56-bright natural killer cell, human	7 studies	21% ± 4%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	7 studies	18% ± 2%	Explore
epithelial cell	6 studies	23% ± 9%	Explore
gamma-delta T cell	6 studies	22% ± 2%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	5 studies	18% ± 2%	Explore
CD8-positive, alpha-beta memory T cell	5 studies	22% ± 6%	Explore
mature NK T cell	5 studies	20% ± 4%	Explore
CD4-positive, alpha-beta T cell	4 studies	18% ± 3%	Explore
CD8-positive, alpha-beta T cell	4 studies	21% ± 4%	Explore
myeloid cell	4 studies	21% ± 3%	Explore
ciliated cell	4 studies	23% ± 4%	Explore
effector memory CD4-positive, alpha-beta T cell	4 studies	18% ± 2%	Explore
effector memory CD8-positive, alpha-beta T cell	4 studies	19% ± 4%	Explore
abnormal cell	4 studies	24% ± 5%	Explore
monocyte	4 studies	18% ± 3%	Explore
neutrophil	3 studies	20% ± 4%	Explore
lymphocyte	3 studies	16% ± 1%	Explore
immature B cell	3 studies	22% ± 4%	Explore
effector CD4-positive, alpha-beta T cell	3 studies	17% ± 1%	Explore
macrophage	3 studies	20% ± 4%	Explore
T cell	3 studies	17% ± 2%	Explore
microglial cell	3 studies	25% ± 5%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
peripheral blood	11 studies	21% ± 4%	Explore
brain	4 studies	26% ± 9%	Explore
liver	3 studies	25% ± 4%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	8367.39	1445 / 1445	100%	118.05	183 / 183
prostate	100%	10787.49	245 / 245	100%	194.65	501 / 502
ovary	100%	4871.12	180 / 180	100%	109.62	429 / 430
thymus	100%	5831.54	652 / 653	100%	150.05	604 / 605
uterus	100%	6177.35	170 / 170	100%	172.26	457 / 459
lung	100%	8304.15	578 / 578	99%	156.03	1149 / 1155
intestine	100%	7224.90	966 / 966	99%	119.15	524 / 527
skin	100%	4709.18	1804 / 1809	100%	138.96	470 / 472
brain	99%	5228.12	2623 / 2642	100%	133.26	705 / 705
bladder	100%	10485.48	21 / 21	99%	211.55	500 / 504
breast	100%	7753.48	459 / 459	99%	142.37	1105 / 1118
liver	100%	7860.18	226 / 226	99%	103.66	401 / 406
stomach	99%	4876.13	357 / 359	99%	104.11	284 / 286
kidney	100%	9009.84	89 / 89	99%	193.55	889 / 901
pancreas	96%	3187.84	314 / 328	99%	145.18	177 / 178
adrenal gland	100%	6145.76	258 / 258	91%	63.70	210 / 230
adipose	100%	7739.36	1204 / 1204	0%	0	0 / 0
blood vessel	100%	8044.87	1335 / 1335	0%	0	0 / 0
eye	0%	0	0 / 0	100%	122.39	80 / 80
lymph node	0%	0	0 / 0	100%	210.40	29 / 29
spleen	100%	16728.69	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	206.51	45 / 45
ureter	0%	0	0 / 0	100%	86.84	1 / 1
peripheral blood	100%	47657.71	925 / 929	0%	0	0 / 0
muscle	99%	3746.31	793 / 803	0%	0	0 / 0
heart	98%	4767.94	846 / 861	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0