Name | Number of supported studies | Average coverage | |
---|---|---|---|
macrophage | 28 studies | 34% ± 18% | |
classical monocyte | 24 studies | 35% ± 11% | |
endothelial cell | 21 studies | 31% ± 17% | |
non-classical monocyte | 21 studies | 36% ± 12% | |
B cell | 19 studies | 24% ± 9% | |
monocyte | 19 studies | 38% ± 19% | |
mast cell | 15 studies | 27% ± 7% | |
fibroblast | 13 studies | 30% ± 17% | |
pericyte | 13 studies | 35% ± 20% | |
microglial cell | 13 studies | 49% ± 16% | |
dendritic cell | 12 studies | 37% ± 14% | |
oligodendrocyte precursor cell | 12 studies | 28% ± 15% | |
smooth muscle cell | 11 studies | 23% ± 9% | |
conventional dendritic cell | 11 studies | 26% ± 10% | |
naive B cell | 10 studies | 28% ± 10% | |
GABAergic neuron | 10 studies | 40% ± 20% | |
myeloid cell | 10 studies | 37% ± 14% | |
adipocyte | 10 studies | 22% ± 8% | |
endothelial cell of lymphatic vessel | 9 studies | 27% ± 7% | |
memory B cell | 9 studies | 26% ± 8% | |
neutrophil | 8 studies | 29% ± 14% | |
regulatory T cell | 8 studies | 22% ± 4% | |
epithelial cell | 7 studies | 33% ± 11% | |
mononuclear phagocyte | 6 studies | 30% ± 15% | |
astrocyte | 6 studies | 32% ± 19% | |
interneuron | 6 studies | 48% ± 27% | |
neuron | 5 studies | 42% ± 16% | |
cardiac muscle cell | 5 studies | 33% ± 7% | |
lymphocyte | 5 studies | 21% ± 4% | |
alveolar macrophage | 5 studies | 50% ± 22% | |
type I pneumocyte | 5 studies | 39% ± 15% | |
natural killer cell | 4 studies | 18% ± 2% | |
plasmablast | 4 studies | 22% ± 4% | |
glutamatergic neuron | 4 studies | 43% ± 17% | |
plasma cell | 4 studies | 41% ± 7% | |
vein endothelial cell | 4 studies | 22% ± 10% | |
club cell | 4 studies | 24% ± 7% | |
type II pneumocyte | 4 studies | 26% ± 6% | |
basal cell | 4 studies | 29% ± 7% | |
oligodendrocyte | 4 studies | 32% ± 15% | |
hematopoietic precursor cell | 3 studies | 35% ± 22% | |
GABAergic interneuron | 3 studies | 28% ± 6% | |
precursor B cell | 3 studies | 22% ± 6% | |
mesothelial cell | 3 studies | 25% ± 0% | |
ciliated cell | 3 studies | 24% ± 3% | |
intermediate monocyte | 3 studies | 48% ± 15% | |
capillary endothelial cell | 3 studies | 23% ± 9% | |
cholangiocyte | 3 studies | 47% ± 17% | |
hepatocyte | 3 studies | 52% ± 28% | |
abnormal cell | 3 studies | 27% ± 14% | |
connective tissue cell | 3 studies | 30% ± 4% | |
T cell | 3 studies | 24% ± 5% | |
CD16-positive, CD56-dim natural killer cell, human | 3 studies | 18% ± 2% | |
muscle cell | 3 studies | 43% ± 22% | |
goblet cell | 3 studies | 29% ± 16% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2584.06 | 1444 / 1445 | 100% | 28.84 | 183 / 183 |
lung | 100% | 4132.35 | 577 / 578 | 100% | 25.16 | 1154 / 1155 |
prostate | 100% | 2183.93 | 245 / 245 | 100% | 24.82 | 500 / 502 |
uterus | 100% | 2365.91 | 170 / 170 | 98% | 23.84 | 451 / 459 |
intestine | 100% | 2472.19 | 966 / 966 | 98% | 18.03 | 516 / 527 |
breast | 100% | 2166.58 | 459 / 459 | 98% | 19.86 | 1092 / 1118 |
bladder | 100% | 2443.48 | 21 / 21 | 97% | 19.37 | 490 / 504 |
thymus | 100% | 1857.98 | 652 / 653 | 97% | 17.39 | 589 / 605 |
pancreas | 99% | 1425.72 | 324 / 328 | 98% | 22.01 | 175 / 178 |
stomach | 98% | 1559.69 | 351 / 359 | 98% | 19.02 | 281 / 286 |
kidney | 98% | 1425.12 | 87 / 89 | 98% | 23.41 | 882 / 901 |
ovary | 100% | 1730.81 | 180 / 180 | 94% | 10.33 | 405 / 430 |
skin | 100% | 4551.73 | 1808 / 1809 | 93% | 27.29 | 438 / 472 |
liver | 99% | 1543.15 | 224 / 226 | 92% | 12.68 | 372 / 406 |
adrenal gland | 100% | 1544.29 | 258 / 258 | 74% | 6.40 | 170 / 230 |
brain | 71% | 618.27 | 1881 / 2642 | 100% | 16.45 | 703 / 705 |
adipose | 100% | 2873.13 | 1204 / 1204 | 0% | 0 | 0 / 0 |
spleen | 100% | 2673.58 | 241 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2470.91 | 1332 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 3924.67 | 801 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 26.19 | 44 / 45 |
peripheral blood | 98% | 4186.99 | 908 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 93% | 13.03 | 27 / 29 |
heart | 90% | 1170.95 | 779 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 50% | 4.12 | 40 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0006281 | Biological process | DNA repair |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0000122 | Biological process | negative regulation of transcription by RNA polymerase II |
GO_0006355 | Biological process | regulation of DNA-templated transcription |
GO_0019222 | Biological process | regulation of metabolic process |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0005654 | Cellular component | nucleoplasm |
GO_0090575 | Cellular component | RNA polymerase II transcription regulator complex |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0000785 | Cellular component | chromatin |
GO_0005634 | Cellular component | nucleus |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0001228 | Molecular function | DNA-binding transcription activator activity, RNA polymerase II-specific |
GO_0001227 | Molecular function | DNA-binding transcription repressor activity, RNA polymerase II-specific |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0003700 | Molecular function | DNA-binding transcription factor activity |
GO_0020037 | Molecular function | heme binding |
GO_0005515 | Molecular function | protein binding |
GO_0098531 | Molecular function | ligand-activated transcription factor activity |
Gene name | BACH1 |
Protein name | Transcription regulator protein BACH1 (BTB and CNC homolog 1) (HA2303) Transcription factor BACH1t BTB domain and CNC homolog 1 |
Synonyms | |
Description | FUNCTION: Transcriptional regulator that acts as a repressor or activator, depending on the context. Binds to NF-E2 DNA binding sites. Plays important roles in coordinating transcription activation and repression by MAFK (By similarity). Together with MAF, represses the transcription of genes under the control of the NFE2L2 oxidative stress pathway . . |
Accessions | ENST00000399921.5 C9IYH8 C9JMP6 H7C4B6 ENST00000548219.5 F8VZL7 ENST00000447177.5 ENST00000546469.5 O14867 M0QZP0 ENST00000468059.1 Q9BXM4 ENST00000422809.5 C9IYR0 ENST00000286800.8 ENST00000435072.1 ENST00000547141.5 ENST00000451655.5 ENST00000550131.5 ENST00000548467.1 |