Name | Number of supported studies | Average coverage | |
---|---|---|---|
lung | 17 studies | 31% ± 18% | |
brain | 17 studies | 51% ± 21% | |
kidney | 9 studies | 47% ± 19% | |
intestine | 9 studies | 29% ± 14% | |
eye | 6 studies | 30% ± 10% | |
pancreas | 4 studies | 67% ± 18% | |
heart | 4 studies | 20% ± 3% | |
breast | 4 studies | 22% ± 5% | |
uterus | 3 studies | 29% ± 17% | |
liver | 3 studies | 24% ± 10% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
kidney | 100% | 39746.46 | 89 / 89 | 98% | 939.82 | 885 / 901 |
stomach | 96% | 20117.75 | 345 / 359 | 97% | 526.75 | 278 / 286 |
thymus | 100% | 17916.60 | 653 / 653 | 90% | 586.74 | 544 / 605 |
pancreas | 97% | 6613.14 | 319 / 328 | 92% | 526.49 | 163 / 178 |
intestine | 92% | 9964.61 | 886 / 966 | 97% | 588.65 | 511 / 527 |
esophagus | 86% | 6986.06 | 1236 / 1445 | 92% | 428.69 | 168 / 183 |
adrenal gland | 91% | 6286.68 | 236 / 258 | 85% | 708.53 | 196 / 230 |
liver | 89% | 4571.05 | 202 / 226 | 85% | 343.82 | 344 / 406 |
brain | 97% | 23935.74 | 2560 / 2642 | 73% | 186.23 | 512 / 705 |
lung | 72% | 5036.20 | 416 / 578 | 95% | 512.59 | 1102 / 1155 |
uterus | 86% | 9656.65 | 146 / 170 | 74% | 246.17 | 339 / 459 |
breast | 48% | 3371.45 | 222 / 459 | 79% | 257.63 | 881 / 1118 |
ovary | 85% | 4990.96 | 153 / 180 | 30% | 44.80 | 131 / 430 |
bladder | 38% | 1432.52 | 8 / 21 | 66% | 265.64 | 331 / 504 |
ureter | 0% | 0 | 0 / 0 | 100% | 173.86 | 1 / 1 |
muscle | 100% | 20606.47 | 801 / 803 | 0% | 0 | 0 / 0 |
skin | 59% | 4385.60 | 1071 / 1809 | 32% | 72.05 | 150 / 472 |
heart | 88% | 8940.88 | 757 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 84% | 340.17 | 38 / 45 |
prostate | 59% | 2486.83 | 145 / 245 | 23% | 30.67 | 113 / 502 |
spleen | 34% | 1157.47 | 82 / 241 | 0% | 0 | 0 / 0 |
peripheral blood | 11% | 716.34 | 106 / 929 | 0% | 0 | 0 / 0 |
adipose | 8% | 333.70 | 91 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 7% | 262.33 | 100 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 4% | 4.26 | 3 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0010468 | Biological process | regulation of gene expression |
GO_0010882 | Biological process | regulation of cardiac muscle contraction by calcium ion signaling |
GO_1903408 | Biological process | positive regulation of P-type sodium:potassium-exchanging transporter activity |
GO_0072659 | Biological process | protein localization to plasma membrane |
GO_0032781 | Biological process | positive regulation of ATP-dependent activity |
GO_0036376 | Biological process | sodium ion export across plasma membrane |
GO_0045087 | Biological process | innate immune response |
GO_0086064 | Biological process | cell communication by electrical coupling involved in cardiac conduction |
GO_1901018 | Biological process | positive regulation of potassium ion transmembrane transporter activity |
GO_0007155 | Biological process | cell adhesion |
GO_0006874 | Biological process | intracellular calcium ion homeostasis |
GO_0046034 | Biological process | ATP metabolic process |
GO_0006883 | Biological process | intracellular sodium ion homeostasis |
GO_0055119 | Biological process | relaxation of cardiac muscle |
GO_0060048 | Biological process | cardiac muscle contraction |
GO_0086013 | Biological process | membrane repolarization during cardiac muscle cell action potential |
GO_1903278 | Biological process | positive regulation of sodium ion export across plasma membrane |
GO_0098655 | Biological process | monoatomic cation transmembrane transport |
GO_0010248 | Biological process | establishment or maintenance of transmembrane electrochemical gradient |
GO_0050821 | Biological process | protein stabilization |
GO_1903288 | Biological process | positive regulation of potassium ion import across plasma membrane |
GO_1903281 | Biological process | positive regulation of calcium:sodium antiporter activity |
GO_0086009 | Biological process | membrane repolarization |
GO_0030007 | Biological process | intracellular potassium ion homeostasis |
GO_0044861 | Biological process | protein transport into plasma membrane raft |
GO_0035725 | Biological process | sodium ion transmembrane transport |
GO_1902600 | Biological process | proton transmembrane transport |
GO_1990573 | Biological process | potassium ion import across plasma membrane |
GO_0016324 | Cellular component | apical plasma membrane |
GO_0036126 | Cellular component | sperm flagellum |
GO_0005890 | Cellular component | sodium:potassium-exchanging ATPase complex |
GO_0005886 | Cellular component | plasma membrane |
GO_0016020 | Cellular component | membrane |
GO_0042383 | Cellular component | sarcolemma |
GO_1903561 | Cellular component | extracellular vesicle |
GO_0070062 | Cellular component | extracellular exosome |
GO_0030315 | Cellular component | T-tubule |
GO_0016328 | Cellular component | lateral plasma membrane |
GO_0031090 | Cellular component | organelle membrane |
GO_0014704 | Cellular component | intercalated disc |
GO_0016323 | Cellular component | basolateral plasma membrane |
GO_0001671 | Molecular function | ATPase activator activity |
GO_0019901 | Molecular function | protein kinase binding |
GO_0005391 | Molecular function | P-type sodium:potassium-exchanging transporter activity |
GO_0030674 | Molecular function | protein-macromolecule adaptor activity |
GO_0051117 | Molecular function | ATPase binding |
GO_0046982 | Molecular function | protein heterodimerization activity |
GO_0023026 | Molecular function | MHC class II protein complex binding |
GO_0005515 | Molecular function | protein binding |
Gene name | ATP1B1 |
Protein name | Alternative protein ATP1B1 Sodium/potassium-transporting ATPase subunit beta Sodium/potassium-transporting ATPase subunit beta-1 (Sodium/potassium-dependent ATPase subunit beta-1) |
Synonyms | ATP1B hCG_37798 |
Description | FUNCTION: This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. The beta subunit regulates, through assembly of alpha/beta heterodimers, the number of sodium pumps transported to the plasma membrane . Plays a role in innate immunity by enhancing virus-triggered induction of interferons (IFNs) and interferon stimulated genes (ISGs). Mechanistically, enhances the ubiquitination of TRAF3 and TRAF6 as well as the phosphorylation of TAK1 and TBK1 . .; FUNCTION: Involved in cell adhesion and establishing epithelial cell polarity. . FUNCTION: Involved in cell adhesion and establishing epithelial cell polarity. .; FUNCTION: This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. . FUNCTION: Involved in cell adhesion and establishing epithelial cell polarity. .; FUNCTION: This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. . FUNCTION: Involved in cell adhesion and establishing epithelial cell polarity. .; FUNCTION: This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. . FUNCTION: Involved in cell adhesion and establishing epithelial cell polarity. .; FUNCTION: This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. . FUNCTION: Involved in cell adhesion and establishing epithelial cell polarity. . FUNCTION: Involved in cell adhesion and establishing epithelial cell polarity. .; FUNCTION: This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. . |
Accessions | A3KLL5 ENST00000690184.1 [P05026-1] ENST00000691106.1 Q58I20 ENST00000688755.1 ENST00000685155.1 ENST00000687745.1 ENST00000685762.1 P05026 ENST00000686702.1 ENST00000689522.1 [P05026-1] B7Z9S8 ENST00000691753.1 A0A8I5KX89 A0A8I5KNT2 Q6LEU2 ENST00000367816.5 [P05026-1] ENST00000494797.2 L0R585 ENST00000685792.1 ENST00000367815.9 [P05026-1] ENST00000691802.1 |