Name | Number of supported studies | Average coverage | |
---|---|---|---|
ciliated cell | 8 studies | 22% ± 6% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 3 studies | 21% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
kidney | 100% | 1971.13 | 89 / 89 | 93% | 23.69 | 838 / 901 |
pancreas | 100% | 407.28 | 328 / 328 | 92% | 16.24 | 163 / 178 |
skin | 97% | 894.49 | 1759 / 1809 | 74% | 19.53 | 348 / 472 |
lung | 89% | 379.48 | 514 / 578 | 81% | 17.64 | 937 / 1155 |
prostate | 95% | 1198.29 | 232 / 245 | 67% | 5.39 | 335 / 502 |
breast | 71% | 333.95 | 328 / 459 | 74% | 7.34 | 829 / 1118 |
liver | 99% | 718.61 | 223 / 226 | 44% | 8.49 | 177 / 406 |
bladder | 67% | 275.48 | 14 / 21 | 68% | 9.52 | 341 / 504 |
esophagus | 46% | 556.41 | 663 / 1445 | 74% | 15.63 | 135 / 183 |
uterus | 29% | 67.98 | 49 / 170 | 89% | 18.64 | 409 / 459 |
thymus | 86% | 158.83 | 559 / 653 | 23% | 1.22 | 141 / 605 |
ureter | 0% | 0 | 0 / 0 | 100% | 17.69 | 1 / 1 |
tonsil | 0% | 0 | 0 / 0 | 98% | 35.17 | 44 / 45 |
spleen | 93% | 452.90 | 225 / 241 | 0% | 0 | 0 / 0 |
ovary | 15% | 26.77 | 27 / 180 | 70% | 6.09 | 301 / 430 |
adrenal gland | 71% | 122.80 | 183 / 258 | 3% | 0.35 | 8 / 230 |
eye | 0% | 0 | 0 / 0 | 68% | 4.78 | 54 / 80 |
adipose | 62% | 119.48 | 746 / 1204 | 0% | 0 | 0 / 0 |
stomach | 17% | 23.97 | 60 / 359 | 32% | 2.74 | 92 / 286 |
intestine | 17% | 24.72 | 169 / 966 | 28% | 2.10 | 150 / 527 |
blood vessel | 42% | 100.74 | 564 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 41% | 1.92 | 12 / 29 |
heart | 24% | 40.63 | 209 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 17% | 28.54 | 158 / 929 | 0% | 0 | 0 / 0 |
brain | 1% | 2.04 | 30 / 2642 | 6% | 0.55 | 44 / 705 |
muscle | 0% | 0.61 | 4 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0047484 | Biological process | regulation of response to osmotic stress |
GO_0098703 | Biological process | calcium ion import across plasma membrane |
GO_0045989 | Biological process | positive regulation of striated muscle contraction |
GO_0006874 | Biological process | intracellular calcium ion homeostasis |
GO_0070509 | Biological process | calcium ion import |
GO_0030036 | Biological process | actin cytoskeleton organization |
GO_0097497 | Biological process | blood vessel endothelial cell delamination |
GO_0001666 | Biological process | response to hypoxia |
GO_0009612 | Biological process | response to mechanical stimulus |
GO_0070374 | Biological process | positive regulation of ERK1 and ERK2 cascade |
GO_0006816 | Biological process | calcium ion transport |
GO_0071651 | Biological process | positive regulation of chemokine (C-C motif) ligand 5 production |
GO_2000340 | Biological process | positive regulation of chemokine (C-X-C motif) ligand 1 production |
GO_0006884 | Biological process | cell volume homeostasis |
GO_0046785 | Biological process | microtubule polymerization |
GO_0071477 | Biological process | cellular hypotonic salinity response |
GO_0071470 | Biological process | cellular response to osmotic stress |
GO_0071642 | Biological process | positive regulation of macrophage inflammatory protein 1 alpha production |
GO_0030103 | Biological process | vasopressin secretion |
GO_0050729 | Biological process | positive regulation of inflammatory response |
GO_0070588 | Biological process | calcium ion transmembrane transport |
GO_0032755 | Biological process | positive regulation of interleukin-6 production |
GO_0007043 | Biological process | cell-cell junction assembly |
GO_0043622 | Biological process | cortical microtubule organization |
GO_0002024 | Biological process | diet induced thermogenesis |
GO_0042538 | Biological process | hyperosmotic salinity response |
GO_1902656 | Biological process | calcium ion import into cytosol |
GO_0050891 | Biological process | multicellular organismal-level water homeostasis |
GO_0031117 | Biological process | positive regulation of microtubule depolymerization |
GO_0010977 | Biological process | negative regulation of neuron projection development |
GO_0007204 | Biological process | positive regulation of cytosolic calcium ion concentration |
GO_0071639 | Biological process | positive regulation of monocyte chemotactic protein-1 production |
GO_0071476 | Biological process | cellular hypotonic response |
GO_0034605 | Biological process | cellular response to heat |
GO_0046330 | Biological process | positive regulation of JNK cascade |
GO_0032868 | Biological process | response to insulin |
GO_0000122 | Biological process | negative regulation of transcription by RNA polymerase II |
GO_0010759 | Biological process | positive regulation of macrophage chemotaxis |
GO_0007015 | Biological process | actin filament organization |
GO_0007231 | Biological process | osmosensory signaling pathway |
GO_1903715 | Biological process | regulation of aerobic respiration |
GO_1903444 | Biological process | negative regulation of brown fat cell differentiation |
GO_0060351 | Biological process | cartilage development involved in endochondral bone morphogenesis |
GO_0042593 | Biological process | glucose homeostasis |
GO_0043117 | Biological process | positive regulation of vascular permeability |
GO_0030864 | Cellular component | cortical actin cytoskeleton |
GO_0009986 | Cellular component | cell surface |
GO_0005881 | Cellular component | cytoplasmic microtubule |
GO_0030175 | Cellular component | filopodium |
GO_0005912 | Cellular component | adherens junction |
GO_0030027 | Cellular component | lamellipodium |
GO_0005886 | Cellular component | plasma membrane |
GO_0016020 | Cellular component | membrane |
GO_0005929 | Cellular component | cilium |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0032587 | Cellular component | ruffle membrane |
GO_0016324 | Cellular component | apical plasma membrane |
GO_0005925 | Cellular component | focal adhesion |
GO_0030426 | Cellular component | growth cone |
GO_0048487 | Molecular function | beta-tubulin binding |
GO_0042802 | Molecular function | identical protein binding |
GO_0042169 | Molecular function | SH2 domain binding |
GO_0005524 | Molecular function | ATP binding |
GO_0005080 | Molecular function | protein kinase C binding |
GO_0005261 | Molecular function | monoatomic cation channel activity |
GO_0046872 | Molecular function | metal ion binding |
GO_0005516 | Molecular function | calmodulin binding |
GO_0003779 | Molecular function | actin binding |
GO_0008289 | Molecular function | lipid binding |
GO_0051015 | Molecular function | actin filament binding |
GO_0005034 | Molecular function | osmosensor activity |
GO_0005515 | Molecular function | protein binding |
GO_0005262 | Molecular function | calcium channel activity |
GO_0015275 | Molecular function | stretch-activated, monoatomic cation-selective, calcium channel activity |
GO_0019901 | Molecular function | protein kinase binding |
GO_0043014 | Molecular function | alpha-tubulin binding |
GO_0008017 | Molecular function | microtubule binding |
Gene name | TRPV4 |
Protein name | Transient receptor potential cation channel subfamily V member 4 Transient receptor potential cation channel subfamily V member 4 (TrpV4) (Osm-9-like TRP channel 4) (OTRPC4) (Transient receptor potential protein 12) (TRP12) (Vanilloid receptor-like channel 2) (Vanilloid receptor-like protein 2) (VRL-2) (Vanilloid receptor-related osmotically-activated channel) (VR-OAC) |
Synonyms | VRL2 VROAC |
Description | FUNCTION: Non-selective calcium permeant cation channel involved in osmotic sensitivity and mechanosensitivity . Activation by exposure to hypotonicity within the physiological range exhibits an outward rectification . Also activated by heat, low pH, citrate and phorbol esters . Increase of intracellular Ca(2+) potentiates currents. Channel activity seems to be regulated by a calmodulin-dependent mechanism with a negative feedback mechanism . Promotes cell-cell junction formation in skin keratinocytes and plays an important role in the formation and/or maintenance of functional intercellular barriers (By similarity). Acts as a regulator of intracellular Ca(2+) in synoviocytes . Plays an obligatory role as a molecular component in the nonselective cation channel activation induced by 4-alpha-phorbol 12,13-didecanoate and hypotonic stimulation in synoviocytes and also regulates production of IL-8 . Together with PKD2, forms mechano- and thermosensitive channels in cilium . Negatively regulates expression of PPARGC1A, UCP1, oxidative metabolism and respiration in adipocytes (By similarity). Regulates expression of chemokines and cytokines related to pro-inflammatory pathway in adipocytes (By similarity). Together with AQP5, controls regulatory volume decrease in salivary epithelial cells (By similarity). Required for normal development and maintenance of bone and cartilage . In its inactive state, may sequester DDX3X at the plasma membrane. When activated, the interaction between both proteins is affected and DDX3X relocalizes to the nucleus . In neurons of the central nervous system, could play a role in triggering voluntary water intake in response to increased sodium concentration in body fluid (By similarity). .; FUNCTION: [Isoform 1]: Non-selective calcium permeant cation channel involved in osmotic sensitivity and mechanosensitivity. Activation by exposure to hypotonicity within the physiological range exhibits an outward rectification. Also activated by phorbol esters. Has the same channel activity as isoform 1, and is activated by the same stimuli. .; FUNCTION: [Isoform 5]: Non-selective calcium permeant cation channel involved in osmotic sensitivity and mechanosensitivity. Activation by exposure to hypotonicity within the physiological range exhibits an outward rectification. Also activated by phorbol esters. Has the same channel activity as isoform 1, and is activated by the same stimuli. .; FUNCTION: [Isoform 2]: Lacks channel activity, due to impaired oligomerization and intracellular retention. .; FUNCTION: [Isoform 4]: Lacks channel activity, due to impaired oligomerization and intracellular retention. .; FUNCTION: [Isoform 6]: Lacks channel activity, due to impaired oligomerization and intracellular retention. .; FUNCTION: (Microbial infection) Facilitates hepatitis C virus (HCV) replication, possibly through its action on DDX3X. .; FUNCTION: (Microbial infection) Facilitates Dengue virus (DENV) replication, possibly through its action on DDX3X. .; FUNCTION: (Microbial infection) Facilitates Zika virus (ZIKV) replication, possibly through its action on DDX3X. . |
Accessions | ENST00000418703.7 [Q9HBA0-1] ENST00000537083.5 [Q9HBA0-2] ENST00000538125.5 ENST00000536838.1 [Q9HBA0-5] ENST00000675670.1 [Q9HBA0-1] Q9HBA0 ENST00000261740.7 [Q9HBA0-1] ENST00000544971.5 [Q9HBA0-6] A0A6Q8PFZ3 F5H6Q4 ENST00000541794.5 [Q9HBA0-4] ENST00000674908.1 |