Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 21 studies | 27% ± 9% | |
fibroblast | 18 studies | 22% ± 6% | |
ciliated cell | 15 studies | 26% ± 8% | |
pericyte | 13 studies | 19% ± 4% | |
smooth muscle cell | 10 studies | 19% ± 2% | |
epithelial cell | 9 studies | 33% ± 18% | |
astrocyte | 9 studies | 33% ± 15% | |
oligodendrocyte | 9 studies | 31% ± 9% | |
type I pneumocyte | 8 studies | 20% ± 3% | |
oligodendrocyte precursor cell | 8 studies | 28% ± 13% | |
endothelial cell of lymphatic vessel | 7 studies | 23% ± 3% | |
basal cell | 7 studies | 29% ± 9% | |
capillary endothelial cell | 7 studies | 17% ± 1% | |
glutamatergic neuron | 7 studies | 40% ± 23% | |
adipocyte | 7 studies | 25% ± 5% | |
microglial cell | 6 studies | 26% ± 6% | |
B cell | 6 studies | 17% ± 2% | |
endothelial cell of artery | 6 studies | 17% ± 2% | |
GABAergic neuron | 6 studies | 41% ± 20% | |
macrophage | 6 studies | 24% ± 6% | |
abnormal cell | 5 studies | 22% ± 8% | |
club cell | 5 studies | 25% ± 6% | |
type II pneumocyte | 5 studies | 20% ± 5% | |
lymphocyte | 5 studies | 22% ± 5% | |
connective tissue cell | 5 studies | 21% ± 2% | |
goblet cell | 5 studies | 28% ± 12% | |
plasma cell | 4 studies | 25% ± 12% | |
secretory cell | 4 studies | 24% ± 6% | |
neuron | 4 studies | 31% ± 10% | |
myeloid cell | 4 studies | 22% ± 4% | |
retinal cone cell | 4 studies | 22% ± 4% | |
cardiac muscle cell | 4 studies | 18% ± 1% | |
respiratory goblet cell | 4 studies | 28% ± 10% | |
naive B cell | 4 studies | 16% ± 1% | |
interneuron | 4 studies | 46% ± 22% | |
natural killer cell | 3 studies | 17% ± 1% | |
ionocyte | 3 studies | 27% ± 5% | |
CD16-negative, CD56-bright natural killer cell, human | 3 studies | 17% ± 1% | |
glomerular endothelial cell | 3 studies | 18% ± 2% | |
progenitor cell | 3 studies | 20% ± 5% | |
myofibroblast cell | 3 studies | 22% ± 3% | |
retina horizontal cell | 3 studies | 19% ± 2% | |
Mueller cell | 3 studies | 20% ± 1% | |
retinal rod cell | 3 studies | 18% ± 0% | |
endothelial cell of vascular tree | 3 studies | 24% ± 6% | |
hepatocyte | 3 studies | 29% ± 11% | |
dendritic cell | 3 studies | 19% ± 2% | |
enteroendocrine cell | 3 studies | 21% ± 4% | |
monocyte | 3 studies | 18% ± 1% | |
mast cell | 3 studies | 19% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2384.95 | 1445 / 1445 | 100% | 19.72 | 183 / 183 |
breast | 100% | 2734.04 | 459 / 459 | 100% | 25.57 | 1117 / 1118 |
prostate | 100% | 2419.74 | 245 / 245 | 100% | 20.10 | 500 / 502 |
lung | 100% | 2270.28 | 576 / 578 | 100% | 15.15 | 1153 / 1155 |
ovary | 100% | 2948.99 | 180 / 180 | 99% | 9.21 | 427 / 430 |
thymus | 100% | 3033.80 | 653 / 653 | 99% | 20.40 | 600 / 605 |
pancreas | 100% | 2651.72 | 328 / 328 | 99% | 15.44 | 176 / 178 |
uterus | 100% | 2965.84 | 170 / 170 | 98% | 12.97 | 452 / 459 |
bladder | 100% | 2644.86 | 21 / 21 | 98% | 11.91 | 496 / 504 |
stomach | 100% | 2702.77 | 359 / 359 | 98% | 13.33 | 281 / 286 |
brain | 99% | 1315.39 | 2612 / 2642 | 99% | 12.26 | 700 / 705 |
intestine | 100% | 2514.82 | 966 / 966 | 97% | 11.93 | 513 / 527 |
kidney | 100% | 1944.84 | 89 / 89 | 95% | 13.74 | 855 / 901 |
adrenal gland | 100% | 2906.27 | 258 / 258 | 93% | 11.10 | 215 / 230 |
liver | 100% | 1512.87 | 226 / 226 | 91% | 7.96 | 369 / 406 |
skin | 100% | 3095.84 | 1808 / 1809 | 90% | 12.71 | 424 / 472 |
adipose | 100% | 2784.34 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2723.09 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 9.48 | 29 / 29 |
muscle | 100% | 2724.64 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 2249.21 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 5.81 | 1 / 1 |
heart | 98% | 1751.35 | 844 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 12.99 | 44 / 45 |
peripheral blood | 63% | 994.28 | 582 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 61% | 5.21 | 49 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006366 | Biological process | transcription by RNA polymerase II |
GO_0003413 | Biological process | chondrocyte differentiation involved in endochondral bone morphogenesis |
GO_0099041 | Biological process | vesicle tethering to Golgi |
GO_0060122 | Biological process | inner ear receptor cell stereocilium organization |
GO_0003281 | Biological process | ventricular septum development |
GO_0007030 | Biological process | Golgi organization |
GO_0045893 | Biological process | positive regulation of DNA-templated transcription |
GO_0006888 | Biological process | endoplasmic reticulum to Golgi vesicle-mediated transport |
GO_0051216 | Biological process | cartilage development |
GO_0090161 | Biological process | Golgi ribbon formation |
GO_0006486 | Biological process | protein glycosylation |
GO_0071806 | Biological process | protein transmembrane transport |
GO_0005801 | Cellular component | cis-Golgi network |
GO_0005856 | Cellular component | cytoskeleton |
GO_0002081 | Cellular component | outer acrosomal membrane |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0033116 | Cellular component | endoplasmic reticulum-Golgi intermediate compartment membrane |
GO_0000139 | Cellular component | Golgi membrane |
GO_0005793 | Cellular component | endoplasmic reticulum-Golgi intermediate compartment |
GO_0030133 | Cellular component | transport vesicle |
GO_0002079 | Cellular component | inner acrosomal membrane |
GO_0031267 | Molecular function | small GTPase binding |
GO_0003713 | Molecular function | transcription coactivator activity |
GO_0005515 | Molecular function | protein binding |
Gene name | TRIP11 |
Protein name | Thyroid hormone receptor interactor 11 Thyroid receptor-interacting protein 11 (TR-interacting protein 11) (TRIP-11) (Clonal evolution-related gene on chromosome 14 protein) (Golgi-associated microtubule-binding protein 210) (GMAP-210) (Trip230) |
Synonyms | CEV14 |
Description | FUNCTION: Is a membrane tether required for vesicle tethering to Golgi. Has an essential role in the maintenance of Golgi structure and function . It is required for efficient anterograde and retrograde trafficking in the early secretory pathway, functioning at both the ER-to-Golgi intermediate compartment (ERGIC) and Golgi complex . Binds the ligand binding domain of the thyroid receptor (THRB) in the presence of triiodothyronine and enhances THRB-modulated transcription. . |
Accessions | Q15643 ENST00000267622.8 [Q15643-1] G3V4R7 ENST00000555516.6 H0YJ97 H0YJI2 ENST00000554357.5 ENST00000557017.1 |