Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 23 studies | 44% ± 17% | |
B cell | 21 studies | 32% ± 17% | |
macrophage | 17 studies | 48% ± 24% | |
microglial cell | 15 studies | 66% ± 20% | |
astrocyte | 13 studies | 40% ± 18% | |
oligodendrocyte precursor cell | 11 studies | 33% ± 14% | |
fibroblast | 11 studies | 31% ± 12% | |
oligodendrocyte | 11 studies | 39% ± 14% | |
GABAergic neuron | 9 studies | 46% ± 23% | |
pericyte | 9 studies | 34% ± 13% | |
glutamatergic neuron | 9 studies | 44% ± 27% | |
naive B cell | 9 studies | 21% ± 3% | |
myeloid cell | 9 studies | 45% ± 23% | |
adipocyte | 9 studies | 33% ± 9% | |
epithelial cell | 8 studies | 35% ± 20% | |
dendritic cell | 8 studies | 48% ± 18% | |
non-classical monocyte | 7 studies | 26% ± 10% | |
mast cell | 7 studies | 30% ± 15% | |
memory B cell | 7 studies | 20% ± 1% | |
endothelial cell of lymphatic vessel | 7 studies | 40% ± 13% | |
basal cell | 7 studies | 40% ± 23% | |
interneuron | 6 studies | 48% ± 23% | |
ciliated cell | 6 studies | 29% ± 9% | |
T cell | 6 studies | 33% ± 10% | |
smooth muscle cell | 6 studies | 29% ± 7% | |
natural killer cell | 5 studies | 33% ± 11% | |
neuron | 5 studies | 47% ± 23% | |
monocyte | 5 studies | 58% ± 13% | |
type I pneumocyte | 5 studies | 39% ± 10% | |
type II pneumocyte | 5 studies | 41% ± 9% | |
classical monocyte | 4 studies | 21% ± 5% | |
plasma cell | 4 studies | 43% ± 12% | |
CD4-positive, alpha-beta T cell | 4 studies | 30% ± 8% | |
cardiac muscle cell | 4 studies | 20% ± 1% | |
mesothelial cell | 4 studies | 37% ± 13% | |
vein endothelial cell | 4 studies | 39% ± 24% | |
club cell | 4 studies | 36% ± 10% | |
leukocyte | 4 studies | 64% ± 12% | |
endothelial cell of sinusoid | 3 studies | 28% ± 16% | |
CD16-negative, CD56-bright natural killer cell, human | 3 studies | 26% ± 9% | |
GABAergic interneuron | 3 studies | 32% ± 5% | |
granule cell | 3 studies | 37% ± 13% | |
immature B cell | 3 studies | 21% ± 4% | |
CD8-positive, alpha-beta T cell | 3 studies | 31% ± 7% | |
mononuclear phagocyte | 3 studies | 38% ± 6% | |
Mueller cell | 3 studies | 22% ± 4% | |
retinal rod cell | 3 studies | 25% ± 6% | |
endothelial cell of vascular tree | 3 studies | 47% ± 20% | |
cholangiocyte | 3 studies | 56% ± 13% | |
hepatocyte | 3 studies | 50% ± 17% | |
retinal pigment epithelial cell | 3 studies | 35% ± 20% | |
connective tissue cell | 3 studies | 22% ± 3% | |
ependymal cell | 3 studies | 37% ± 20% | |
alveolar macrophage | 3 studies | 59% ± 15% | |
capillary endothelial cell | 3 studies | 35% ± 7% | |
respiratory goblet cell | 3 studies | 44% ± 11% | |
lymphocyte | 3 studies | 52% ± 13% | |
mural cell | 3 studies | 46% ± 17% | |
abnormal cell | 3 studies | 33% ± 19% | |
mucus secreting cell | 3 studies | 43% ± 2% | |
regulatory T cell | 3 studies | 32% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2080.99 | 1445 / 1445 | 100% | 25.57 | 183 / 183 |
intestine | 100% | 2125.71 | 966 / 966 | 100% | 24.73 | 527 / 527 |
pancreas | 100% | 1468.53 | 328 / 328 | 100% | 26.96 | 178 / 178 |
prostate | 100% | 1783.74 | 245 / 245 | 100% | 16.60 | 502 / 502 |
thymus | 100% | 2399.80 | 653 / 653 | 100% | 29.88 | 605 / 605 |
lung | 100% | 2279.57 | 578 / 578 | 100% | 27.02 | 1153 / 1155 |
brain | 100% | 1376.56 | 2637 / 2642 | 100% | 18.26 | 705 / 705 |
uterus | 100% | 1987.31 | 170 / 170 | 100% | 24.84 | 458 / 459 |
skin | 100% | 2523.07 | 1805 / 1809 | 100% | 32.98 | 472 / 472 |
kidney | 100% | 2014.33 | 89 / 89 | 100% | 25.13 | 899 / 901 |
stomach | 100% | 1807.60 | 359 / 359 | 100% | 24.11 | 285 / 286 |
breast | 100% | 2171.26 | 459 / 459 | 100% | 21.60 | 1114 / 1118 |
liver | 100% | 1024.86 | 226 / 226 | 100% | 20.42 | 404 / 406 |
ovary | 100% | 1655.76 | 180 / 180 | 99% | 19.31 | 427 / 430 |
bladder | 100% | 1925.76 | 21 / 21 | 99% | 22.97 | 500 / 504 |
adrenal gland | 100% | 2091.55 | 258 / 258 | 97% | 15.31 | 222 / 230 |
adipose | 100% | 2340.28 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 37.60 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 60.63 | 29 / 29 |
spleen | 100% | 3331.90 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 32.07 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 14.78 | 1 / 1 |
blood vessel | 100% | 1984.82 | 1334 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 1756.47 | 802 / 803 | 0% | 0 | 0 / 0 |
heart | 100% | 1323.68 | 858 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 99% | 2744.38 | 920 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_1902017 | Biological process | regulation of cilium assembly |
GO_0090630 | Biological process | activation of GTPase activity |
GO_0042803 | Molecular function | protein homodimerization activity |
GO_0071889 | Molecular function | 14-3-3 protein binding |
GO_0005515 | Molecular function | protein binding |
GO_0005096 | Molecular function | GTPase activator activity |
Gene name | TBC1D22A |
Protein name | TBC1 domain family member 22A |
Synonyms | C22orf4 |
Description | FUNCTION: May act as a GTPase-activating protein for Rab family protein(s). . |
Accessions | ENST00000337137.9 [Q8WUA7-1] Q8WUA7 F8WBF7 ENST00000380995.5 ENST00000406733.1 [Q8WUA7-4] ENST00000441162.5 [Q8WUA7-3] ENST00000355704.7 [Q8WUA7-2] B0QYI1 ENST00000441936.5 A0A0A0MRY0 ENST00000407381.7 F8WDP1 ENST00000394449.6 |