SMIM7 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
fibroblast	21 studies	25% ± 11%	Explore
endothelial cell	16 studies	25% ± 11%	Explore
B cell	12 studies	21% ± 7%	Explore
smooth muscle cell	11 studies	20% ± 5%	Explore
natural killer cell	10 studies	21% ± 5%	Explore
pericyte	10 studies	23% ± 7%	Explore
CD8-positive, alpha-beta T cell	8 studies	20% ± 5%	Explore
epithelial cell	8 studies	37% ± 23%	Explore
plasmacytoid dendritic cell	8 studies	24% ± 5%	Explore
classical monocyte	7 studies	29% ± 14%	Explore
non-classical monocyte	7 studies	30% ± 16%	Explore
CD4-positive, alpha-beta T cell	7 studies	19% ± 3%	Explore
macrophage	7 studies	25% ± 9%	Explore
connective tissue cell	6 studies	28% ± 11%	Explore
basal cell	6 studies	33% ± 18%	Explore
ciliated cell	6 studies	39% ± 16%	Explore
CD16-negative, CD56-bright natural killer cell, human	5 studies	19% ± 4%	Explore
T cell	5 studies	17% ± 2%	Explore
naive B cell	5 studies	17% ± 2%	Explore
astrocyte	5 studies	28% ± 11%	Explore
monocyte	5 studies	21% ± 4%	Explore
regulatory T cell	5 studies	17% ± 3%	Explore
type I pneumocyte	4 studies	25% ± 9%	Explore
CD16-positive, CD56-dim natural killer cell, human	4 studies	20% ± 3%	Explore
conventional dendritic cell	4 studies	37% ± 18%	Explore
mature NK T cell	4 studies	18% ± 3%	Explore
capillary endothelial cell	4 studies	17% ± 1%	Explore
myofibroblast cell	4 studies	23% ± 4%	Explore
progenitor cell	4 studies	19% ± 2%	Explore
epithelial cell of proximal tubule	4 studies	20% ± 2%	Explore
mesothelial cell	4 studies	28% ± 15%	Explore
plasma cell	4 studies	34% ± 11%	Explore
retinal rod cell	4 studies	27% ± 11%	Explore
neuron	4 studies	28% ± 13%	Explore
endothelial cell of lymphatic vessel	4 studies	22% ± 10%	Explore
oligodendrocyte precursor cell	4 studies	21% ± 3%	Explore
pancreatic A cell	3 studies	32% ± 9%	Explore
effector memory CD8-positive, alpha-beta T cell	3 studies	23% ± 4%	Explore
exhausted T cell	3 studies	24% ± 8%	Explore
hematopoietic precursor cell	3 studies	29% ± 6%	Explore
glomerular endothelial cell	3 studies	21% ± 4%	Explore
kidney distal convoluted tubule epithelial cell	3 studies	21% ± 0%	Explore
renal alpha-intercalated cell	3 studies	25% ± 5%	Explore
endothelial cell of artery	3 studies	20% ± 1%	Explore
neural crest cell	3 studies	24% ± 2%	Explore
memory B cell	3 studies	18% ± 2%	Explore
retinal bipolar neuron	3 studies	29% ± 9%	Explore
abnormal cell	3 studies	25% ± 6%	Explore
amacrine cell	3 studies	34% ± 10%	Explore
retina horizontal cell	3 studies	23% ± 10%	Explore
retinal cone cell	3 studies	44% ± 18%	Explore
Mueller cell	3 studies	25% ± 7%	Explore
glutamatergic neuron	3 studies	41% ± 23%	Explore
microglial cell	3 studies	17% ± 2%	Explore
oligodendrocyte	3 studies	21% ± 3%	Explore
dendritic cell	3 studies	38% ± 20%	Explore
goblet cell	3 studies	29% ± 8%	Explore
intestinal crypt stem cell	3 studies	19% ± 4%	Explore
CD8-positive, alpha-beta memory T cell	3 studies	22% ± 8%	Explore
mast cell	3 studies	18% ± 4%	Explore
secretory cell	3 studies	30% ± 19%	Explore
CD4-positive, alpha-beta memory T cell	3 studies	17% ± 2%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
lung	7 studies	32% ± 14%	Explore
peripheral blood	6 studies	25% ± 9%	Explore
intestine	6 studies	24% ± 12%	Explore
brain	6 studies	28% ± 16%	Explore
eye	5 studies	26% ± 11%	Explore
kidney	4 studies	18% ± 1%	Explore
liver	3 studies	27% ± 16%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	100%	2352.00	2642 / 2642	100%	24.55	705 / 705
breast	100%	3458.41	459 / 459	100%	25.01	1118 / 1118
esophagus	100%	2745.13	1445 / 1445	100%	15.42	183 / 183
intestine	100%	2912.43	966 / 966	100%	16.36	527 / 527
kidney	100%	3139.44	89 / 89	100%	17.97	901 / 901
liver	100%	2417.21	226 / 226	100%	16.81	406 / 406
lung	100%	2936.72	578 / 578	100%	17.09	1155 / 1155
ovary	100%	3178.49	180 / 180	100%	22.05	430 / 430
pancreas	100%	2333.42	328 / 328	100%	18.77	178 / 178
prostate	100%	3786.93	245 / 245	100%	34.01	502 / 502
skin	100%	3167.98	1809 / 1809	100%	18.70	472 / 472
stomach	100%	2814.26	359 / 359	100%	14.99	286 / 286
thymus	100%	3652.87	653 / 653	100%	24.92	605 / 605
uterus	100%	3295.48	170 / 170	100%	18.61	459 / 459
bladder	100%	2988.05	21 / 21	100%	17.54	503 / 504
adrenal gland	100%	3525.84	258 / 258	100%	27.51	229 / 230
adipose	100%	3287.49	1204 / 1204	0%	0	0 / 0
blood vessel	100%	3089.97	1335 / 1335	0%	0	0 / 0
eye	0%	0	0 / 0	100%	17.53	80 / 80
lymph node	0%	0	0 / 0	100%	20.09	29 / 29
spleen	100%	2886.73	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	15.04	45 / 45
ureter	0%	0	0 / 0	100%	12.25	1 / 1
muscle	99%	1369.20	795 / 803	0%	0	0 / 0
heart	99%	1770.19	851 / 861	0%	0	0 / 0
peripheral blood	93%	1533.01	866 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0