SAMD9 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
natural killer cell	25 studies	22% ± 5%	Explore
CD16-positive, CD56-dim natural killer cell, human	13 studies	25% ± 5%	Explore
regulatory T cell	13 studies	20% ± 4%	Explore
CD8-positive, alpha-beta T cell	12 studies	22% ± 5%	Explore
gamma-delta T cell	12 studies	20% ± 4%	Explore
CD16-negative, CD56-bright natural killer cell, human	10 studies	21% ± 5%	Explore
mature NK T cell	10 studies	22% ± 4%	Explore
mucosal invariant T cell	8 studies	18% ± 4%	Explore
T cell	7 studies	22% ± 6%	Explore
CD8-positive, alpha-beta memory T cell	7 studies	22% ± 4%	Explore
naive B cell	7 studies	20% ± 3%	Explore
non-classical monocyte	7 studies	21% ± 4%	Explore
B cell	7 studies	19% ± 2%	Explore
effector memory CD8-positive, alpha-beta T cell	7 studies	22% ± 4%	Explore
CD4-positive, alpha-beta T cell	6 studies	19% ± 4%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	5 studies	22% ± 6%	Explore
squamous epithelial cell	4 studies	41% ± 19%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	4 studies	20% ± 4%	Explore
epithelial cell	4 studies	26% ± 12%	Explore
basal cell	4 studies	29% ± 8%	Explore
endothelial cell	4 studies	16% ± 1%	Explore
CD4-positive, alpha-beta memory T cell	4 studies	20% ± 3%	Explore
T follicular helper cell	4 studies	17% ± 2%	Explore
memory B cell	4 studies	18% ± 1%	Explore
classical monocyte	3 studies	21% ± 2%	Explore
effector CD8-positive, alpha-beta T cell	3 studies	21% ± 5%	Explore
glomerular endothelial cell	3 studies	18% ± 1%	Explore
ciliated cell	3 studies	28% ± 4%	Explore
effector memory CD4-positive, alpha-beta T cell	3 studies	18% ± 3%	Explore
innate lymphoid cell	3 studies	21% ± 4%	Explore
T-helper 17 cell	3 studies	17% ± 1%	Explore
effector memory CD8-positive, alpha-beta T cell, terminally differentiated	3 studies	19% ± 5%	Explore
double negative thymocyte	3 studies	22% ± 0%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
peripheral blood	7 studies	20% ± 3%	Explore
lung	3 studies	29% ± 7%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	96%	3009.61	1386 / 1445	99%	98.26	182 / 183
breast	98%	649.02	450 / 459	91%	25.24	1017 / 1118
lung	100%	1275.18	576 / 578	89%	23.27	1024 / 1155
ovary	97%	712.25	175 / 180	86%	16.61	369 / 430
uterus	98%	737.05	167 / 170	84%	32.29	386 / 459
stomach	91%	614.07	327 / 359	80%	22.52	230 / 286
adrenal gland	97%	938.60	251 / 258	73%	8.91	169 / 230
intestine	99%	1198.43	952 / 966	72%	18.04	380 / 527
kidney	98%	649.15	87 / 89	69%	10.00	626 / 901
thymus	96%	596.24	628 / 653	68%	8.18	412 / 605
pancreas	69%	251.27	227 / 328	94%	29.54	167 / 178
bladder	86%	505.86	18 / 21	71%	19.59	358 / 504
skin	69%	786.85	1247 / 1809	77%	16.02	364 / 472
prostate	95%	537.97	232 / 245	24%	2.24	120 / 502
spleen	100%	3004.14	241 / 241	0%	0	0 / 0
ureter	0%	0	0 / 0	100%	7.78	1 / 1
adipose	99%	841.22	1195 / 1204	0%	0	0 / 0
blood vessel	96%	644.35	1285 / 1335	0%	0	0 / 0
peripheral blood	95%	2028.93	881 / 929	0%	0	0 / 0
tonsil	0%	0	0 / 0	93%	57.31	42 / 45
lymph node	0%	0	0 / 0	86%	17.78	25 / 29
liver	62%	227.93	139 / 226	18%	2.15	74 / 406
brain	19%	71.16	502 / 2642	58%	8.45	409 / 705
heart	76%	293.36	652 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	11%	0.90	9 / 80
muscle	7%	19.66	57 / 803	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0