PDLIM2 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
fibroblast	27 studies	35% ± 13%	Explore
natural killer cell	16 studies	21% ± 4%	Explore
CD8-positive, alpha-beta T cell	15 studies	22% ± 6%	Explore
pericyte	15 studies	27% ± 15%	Explore
smooth muscle cell	14 studies	25% ± 10%	Explore
connective tissue cell	10 studies	36% ± 13%	Explore
CD16-positive, CD56-dim natural killer cell, human	9 studies	24% ± 6%	Explore
B cell	9 studies	21% ± 4%	Explore
gamma-delta T cell	9 studies	22% ± 5%	Explore
T cell	8 studies	21% ± 11%	Explore
non-classical monocyte	8 studies	30% ± 14%	Explore
CD16-negative, CD56-bright natural killer cell, human	8 studies	22% ± 5%	Explore
CD4-positive, alpha-beta T cell	8 studies	20% ± 4%	Explore
mature NK T cell	8 studies	19% ± 4%	Explore
CD8-positive, alpha-beta memory T cell	7 studies	22% ± 8%	Explore
classical monocyte	7 studies	27% ± 9%	Explore
endothelial cell	7 studies	32% ± 11%	Explore
regulatory T cell	7 studies	19% ± 2%	Explore
type I pneumocyte	6 studies	47% ± 13%	Explore
mucosal invariant T cell	6 studies	19% ± 2%	Explore
plasmacytoid dendritic cell	6 studies	21% ± 5%	Explore
effector memory CD8-positive, alpha-beta T cell	5 studies	22% ± 4%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	5 studies	20% ± 3%	Explore
naive B cell	5 studies	19% ± 1%	Explore
epithelial cell	5 studies	32% ± 10%	Explore
memory B cell	4 studies	18% ± 2%	Explore
enterocyte	4 studies	21% ± 5%	Explore
endothelial cell of lymphatic vessel	4 studies	23% ± 5%	Explore
effector memory CD4-positive, alpha-beta T cell	4 studies	19% ± 4%	Explore
conventional dendritic cell	3 studies	36% ± 14%	Explore
exhausted T cell	3 studies	29% ± 9%	Explore
podocyte	3 studies	62% ± 12%	Explore
adventitial cell	3 studies	25% ± 12%	Explore
effector CD8-positive, alpha-beta T cell	3 studies	22% ± 2%	Explore
macrophage	3 studies	23% ± 7%	Explore
dendritic cell	3 studies	38% ± 18%	Explore
myofibroblast cell	3 studies	24% ± 5%	Explore
CD4-positive, alpha-beta memory T cell	3 studies	21% ± 3%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
peripheral blood	9 studies	21% ± 5%	Explore
lung	5 studies	24% ± 9%	Explore
uterus	4 studies	20% ± 5%	Explore
placenta	3 studies	21% ± 4%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
lung	100%	5961.25	576 / 578	98%	3.97	1135 / 1155
esophagus	100%	4218.43	1442 / 1445	97%	5.10	178 / 183
breast	98%	2138.60	452 / 459	97%	3.85	1083 / 1118
intestine	100%	2648.61	963 / 966	95%	3.46	500 / 527
skin	100%	8408.81	1809 / 1809	94%	3.87	445 / 472
ovary	97%	2020.09	175 / 180	96%	3.15	412 / 430
prostate	96%	1861.29	235 / 245	96%	2.23	483 / 502
uterus	100%	2865.68	170 / 170	92%	3.95	422 / 459
liver	91%	1914.55	206 / 226	95%	2.64	384 / 406
bladder	100%	2171.05	21 / 21	85%	2.94	430 / 504
brain	86%	1688.06	2259 / 2642	100%	4.13	703 / 705
kidney	100%	4169.98	89 / 89	82%	3.37	742 / 901
thymus	85%	1271.80	558 / 653	94%	2.51	566 / 605
adrenal gland	83%	1182.46	214 / 258	86%	5.80	197 / 230
stomach	50%	977.73	179 / 359	97%	3.58	277 / 286
pancreas	10%	105.76	33 / 328	97%	5.60	172 / 178
lymph node	0%	0	0 / 0	100%	5.76	29 / 29
spleen	100%	17968.95	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	4.15	45 / 45
blood vessel	100%	5802.73	1332 / 1335	0%	0	0 / 0
eye	0%	0	0 / 0	99%	2.28	79 / 80
muscle	98%	2967.11	786 / 803	0%	0	0 / 0
adipose	98%	2654.32	1178 / 1204	0%	0	0 / 0
peripheral blood	84%	2580.12	781 / 929	0%	0	0 / 0
heart	66%	894.76	564 / 861	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1