MRPS16 | OmnibusX

I. Expression across cell types

Name	Number of supported studies	Average coverage
B cell	12 studies	21% ± 6%	Explore
plasma cell	11 studies	29% ± 12%	Explore
macrophage	10 studies	22% ± 9%	Explore
epithelial cell	10 studies	36% ± 18%	Explore
CD8-positive, alpha-beta T cell	9 studies	24% ± 7%	Explore
regulatory T cell	8 studies	22% ± 7%	Explore
basal cell	7 studies	27% ± 16%	Explore
ciliated cell	7 studies	33% ± 12%	Explore
CD4-positive, alpha-beta T cell	7 studies	28% ± 9%	Explore
natural killer cell	7 studies	24% ± 7%	Explore
endothelial cell	7 studies	28% ± 9%	Explore
plasmacytoid dendritic cell	7 studies	22% ± 7%	Explore
plasmablast	6 studies	45% ± 20%	Explore
conventional dendritic cell	6 studies	27% ± 12%	Explore
CD4-positive, alpha-beta memory T cell	5 studies	18% ± 2%	Explore
classical monocyte	5 studies	24% ± 8%	Explore
epithelial cell of proximal tubule	5 studies	19% ± 3%	Explore
transit amplifying cell	5 studies	20% ± 2%	Explore
fibroblast	5 studies	26% ± 11%	Explore
gamma-delta T cell	5 studies	25% ± 19%	Explore
hematopoietic precursor cell	4 studies	29% ± 10%	Explore
non-classical monocyte	4 studies	27% ± 7%	Explore
goblet cell	4 studies	27% ± 10%	Explore
intestinal crypt stem cell	4 studies	22% ± 8%	Explore
pericyte	4 studies	18% ± 3%	Explore
erythroblast	4 studies	34% ± 18%	Explore
precursor B cell	4 studies	24% ± 8%	Explore
abnormal cell	4 studies	24% ± 5%	Explore
effector CD8-positive, alpha-beta T cell	4 studies	21% ± 4%	Explore
naive B cell	4 studies	18% ± 4%	Explore
T cell	4 studies	19% ± 2%	Explore
pancreatic A cell	3 studies	38% ± 7%	Explore
type B pancreatic cell	3 studies	35% ± 5%	Explore
CD16-negative, CD56-bright natural killer cell, human	3 studies	18% ± 1%	Explore
effector memory CD8-positive, alpha-beta T cell	3 studies	18% ± 1%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	3 studies	18% ± 1%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	3 studies	22% ± 3%	Explore
kidney loop of Henle epithelial cell	3 studies	20% ± 2%	Explore
neural crest cell	3 studies	18% ± 1%	Explore
progenitor cell	3 studies	30% ± 18%	Explore
myofibroblast cell	3 studies	18% ± 2%	Explore
smooth muscle cell	3 studies	21% ± 2%	Explore
myeloid cell	3 studies	28% ± 9%	Explore
pro-B cell	3 studies	22% ± 2%	Explore
astrocyte	3 studies	22% ± 3%	Explore
monocyte	3 studies	21% ± 3%	Explore
germinal center B cell	3 studies	18% ± 2%	Explore
exhausted T cell	3 studies	18% ± 1%	Explore
intermediate monocyte	3 studies	25% ± 10%	Explore
GABAergic neuron	3 studies	32% ± 11%	Explore
glutamatergic neuron	3 studies	42% ± 15%	Explore
dendritic cell	3 studies	39% ± 12%	Explore
enteroendocrine cell	3 studies	27% ± 10%	Explore
erythrocyte	3 studies	34% ± 19%	Explore
neuron	3 studies	27% ± 8%	Explore
CD8-positive, alpha-beta memory T cell	3 studies	21% ± 5%	Explore
memory B cell	3 studies	24% ± 9%	Explore
luminal hormone-sensing cell of mammary gland	3 studies	17% ± 2%	Explore

II. Expression across tissues

Name	Number of supported studies	Average coverage
lung	8 studies	25% ± 10%	Explore
peripheral blood	7 studies	22% ± 6%	Explore
liver	4 studies	29% ± 21%	Explore
brain	4 studies	27% ± 13%	Explore
pancreas	3 studies	37% ± 5%	Explore
kidney	3 studies	16% ± 0%	Explore
intestine	3 studies	24% ± 9%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	2474.69	1445 / 1445	100%	60.83	183 / 183
liver	100%	2148.88	226 / 226	100%	70.81	406 / 406
ovary	100%	1886.15	180 / 180	100%	91.58	430 / 430
pancreas	100%	1654.45	328 / 328	100%	62.80	178 / 178
prostate	100%	2088.66	245 / 245	100%	89.89	502 / 502
stomach	100%	2124.59	359 / 359	100%	82.19	286 / 286
breast	100%	2444.76	459 / 459	100%	105.61	1117 / 1118
intestine	100%	2526.36	966 / 966	100%	95.43	526 / 527
bladder	100%	2231.33	21 / 21	100%	86.05	503 / 504
uterus	100%	2017.97	170 / 170	100%	87.68	458 / 459
thymus	100%	1968.13	652 / 653	100%	65.71	604 / 605
skin	100%	3180.06	1809 / 1809	100%	74.81	470 / 472
kidney	100%	2770.45	89 / 89	99%	58.34	895 / 901
lung	99%	1937.87	574 / 578	100%	83.77	1155 / 1155
brain	99%	1625.57	2619 / 2642	100%	68.53	705 / 705
adrenal gland	100%	3748.56	258 / 258	98%	53.94	225 / 230
adipose	100%	2447.61	1204 / 1204	0%	0	0 / 0
eye	0%	0	0 / 0	100%	81.27	80 / 80
lymph node	0%	0	0 / 0	100%	101.79	29 / 29
muscle	100%	4510.73	803 / 803	0%	0	0 / 0
spleen	100%	2275.11	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	88.14	45 / 45
ureter	0%	0	0 / 0	100%	50.45	1 / 1
blood vessel	100%	1841.52	1332 / 1335	0%	0	0 / 0
heart	98%	2698.90	841 / 861	0%	0	0 / 0
peripheral blood	87%	1791.72	805 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

III. Associated gene sets

GO_0006412	Biological process	translation
GO_0032543	Biological process	mitochondrial translation
GO_0005829	Cellular component	cytosol
GO_0005763	Cellular component	mitochondrial small ribosomal subunit
GO_0005743	Cellular component	mitochondrial inner membrane
GO_0005739	Cellular component	mitochondrion
GO_0003735	Molecular function	structural constituent of ribosome
GO_0005515	Molecular function	protein binding

IV. Literature review

[source]

Gene name	MRPS16
Protein name	Small ribosomal subunit protein bS16m (28S ribosomal protein S16, mitochondrial) (MRP-S16) (S16mt) Small ribosomal subunit protein bS16m (28S ribosomal protein S16, mitochondrial)
Synonyms	RPMS16 CGI-132
Description
Accessions	ENST00000372945.8 [Q9Y3D3-1] A6ND22 ENST00000372940.3 Q9Y3D3

MRPS16 report

I. Expression across cell types

II. Expression across tissues

III. Associated gene sets

IV. Literature review