Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 6 studies | 20% ± 4% | |
epithelial cell | 5 studies | 25% ± 11% | |
GABAergic neuron | 3 studies | 27% ± 3% | |
glutamatergic neuron | 3 studies | 32% ± 6% | |
astrocyte | 3 studies | 21% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1833.30 | 1444 / 1445 | 100% | 29.07 | 183 / 183 |
breast | 100% | 2021.59 | 459 / 459 | 100% | 44.46 | 1116 / 1118 |
prostate | 100% | 1664.09 | 245 / 245 | 99% | 18.73 | 499 / 502 |
intestine | 100% | 1996.34 | 966 / 966 | 99% | 21.99 | 523 / 527 |
lung | 100% | 1693.58 | 578 / 578 | 99% | 21.98 | 1146 / 1155 |
bladder | 100% | 2142.10 | 21 / 21 | 99% | 18.43 | 499 / 504 |
brain | 99% | 1255.13 | 2619 / 2642 | 100% | 21.72 | 704 / 705 |
skin | 100% | 3105.19 | 1809 / 1809 | 99% | 24.84 | 466 / 472 |
uterus | 100% | 2268.86 | 170 / 170 | 99% | 17.86 | 453 / 459 |
thymus | 100% | 1713.81 | 653 / 653 | 98% | 15.90 | 595 / 605 |
stomach | 100% | 1410.91 | 359 / 359 | 98% | 23.47 | 281 / 286 |
pancreas | 97% | 901.53 | 319 / 328 | 99% | 16.88 | 176 / 178 |
kidney | 100% | 1169.99 | 89 / 89 | 95% | 15.97 | 857 / 901 |
ovary | 100% | 1914.65 | 180 / 180 | 94% | 12.95 | 405 / 430 |
adrenal gland | 100% | 1692.11 | 258 / 258 | 89% | 9.18 | 205 / 230 |
liver | 100% | 887.93 | 226 / 226 | 81% | 7.89 | 330 / 406 |
adipose | 100% | 2150.96 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1733.57 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 19.92 | 29 / 29 |
muscle | 100% | 1658.46 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 1738.86 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 20.11 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 7.61 | 1 / 1 |
heart | 98% | 1162.20 | 843 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 94% | 12.48 | 75 / 80 |
peripheral blood | 87% | 1735.42 | 809 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0071364 | Biological process | cellular response to epidermal growth factor stimulus |
GO_0031100 | Biological process | animal organ regeneration |
GO_0033148 | Biological process | positive regulation of intracellular estrogen receptor signaling pathway |
GO_0060218 | Biological process | hematopoietic stem cell differentiation |
GO_0060261 | Biological process | positive regulation of transcription initiation by RNA polymerase II |
GO_0043066 | Biological process | negative regulation of apoptotic process |
GO_0035050 | Biological process | embryonic heart tube development |
GO_0045023 | Biological process | G0 to G1 transition |
GO_0042789 | Biological process | mRNA transcription by RNA polymerase II |
GO_0000902 | Biological process | cell morphogenesis |
GO_0045618 | Biological process | positive regulation of keratinocyte differentiation |
GO_0030224 | Biological process | monocyte differentiation |
GO_0035357 | Biological process | peroxisome proliferator activated receptor signaling pathway |
GO_0001525 | Biological process | angiogenesis |
GO_0060744 | Biological process | mammary gland branching involved in thelarche |
GO_0001892 | Biological process | embryonic placenta development |
GO_0060750 | Biological process | epithelial cell proliferation involved in mammary gland duct elongation |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0051123 | Biological process | RNA polymerase II preinitiation complex assembly |
GO_0010628 | Biological process | positive regulation of gene expression |
GO_0071383 | Biological process | cellular response to steroid hormone stimulus |
GO_0097067 | Biological process | cellular response to thyroid hormone stimulus |
GO_2001141 | Biological process | regulation of RNA biosynthetic process |
GO_0010839 | Biological process | negative regulation of keratinocyte proliferation |
GO_0006606 | Biological process | protein import into nucleus |
GO_0045648 | Biological process | positive regulation of erythrocyte differentiation |
GO_0070562 | Biological process | regulation of vitamin D receptor signaling pathway |
GO_0048822 | Biological process | enucleate erythrocyte development |
GO_0035162 | Biological process | embryonic hemopoiesis |
GO_0030216 | Biological process | keratinocyte differentiation |
GO_0016567 | Biological process | protein ubiquitination |
GO_0048821 | Biological process | erythrocyte development |
GO_2000347 | Biological process | positive regulation of hepatocyte proliferation |
GO_0003406 | Biological process | retinal pigment epithelium development |
GO_0060335 | Biological process | positive regulation of type II interferon-mediated signaling pathway |
GO_0001889 | Biological process | liver development |
GO_0045893 | Biological process | positive regulation of DNA-templated transcription |
GO_0006702 | Biological process | androgen biosynthetic process |
GO_0007420 | Biological process | brain development |
GO_0002154 | Biological process | thyroid hormone receptor signaling pathway |
GO_0045444 | Biological process | fat cell differentiation |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0006590 | Biological process | thyroid hormone generation |
GO_0030518 | Biological process | nuclear receptor-mediated steroid hormone signaling pathway |
GO_0070318 | Biological process | positive regulation of G0 to G1 transition |
GO_0035729 | Biological process | cellular response to hepatocyte growth factor stimulus |
GO_0060745 | Biological process | mammary gland branching involved in pregnancy |
GO_0000122 | Biological process | negative regulation of transcription by RNA polymerase II |
GO_0035116 | Biological process | embryonic hindlimb morphogenesis |
GO_0032968 | Biological process | positive regulation of transcription elongation by RNA polymerase II |
GO_0035855 | Biological process | megakaryocyte development |
GO_0045665 | Biological process | negative regulation of neuron differentiation |
GO_0002088 | Biological process | lens development in camera-type eye |
GO_0007595 | Biological process | lactation |
GO_0003222 | Biological process | ventricular trabecula myocardium morphogenesis |
GO_0005634 | Cellular component | nucleus |
GO_0005730 | Cellular component | nucleolus |
GO_0016592 | Cellular component | mediator complex |
GO_0005654 | Cellular component | nucleoplasm |
GO_0016020 | Cellular component | membrane |
GO_0000785 | Cellular component | chromatin |
GO_0000151 | Cellular component | ubiquitin ligase complex |
GO_0070847 | Cellular component | core mediator complex |
GO_0140297 | Molecular function | DNA-binding transcription factor binding |
GO_0001223 | Molecular function | transcription coactivator binding |
GO_0042975 | Molecular function | peroxisome proliferator activated receptor binding |
GO_0031490 | Molecular function | chromatin DNA binding |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_1990841 | Molecular function | promoter-specific chromatin binding |
GO_0003682 | Molecular function | chromatin binding |
GO_0042974 | Molecular function | nuclear retinoic acid receptor binding |
GO_0035035 | Molecular function | histone acetyltransferase binding |
GO_0140296 | Molecular function | general transcription initiation factor binding |
GO_0042809 | Molecular function | nuclear vitamin D receptor binding |
GO_0030374 | Molecular function | nuclear receptor coactivator activity |
GO_0061630 | Molecular function | ubiquitin protein ligase activity |
GO_0050693 | Molecular function | LBD domain binding |
GO_0030331 | Molecular function | nuclear estrogen receptor binding |
GO_0005515 | Molecular function | protein binding |
GO_0046966 | Molecular function | nuclear thyroid hormone receptor binding |
GO_0016922 | Molecular function | nuclear receptor binding |
GO_0003714 | Molecular function | transcription corepressor activity |
GO_0003712 | Molecular function | transcription coregulator activity |
GO_0003713 | Molecular function | transcription coactivator activity |
Gene name | MED1 |
Protein name | Mediator of RNA polymerase II transcription subunit 1 (Activator-recruited cofactor 205 kDa component) (ARC205) (Mediator complex subunit 1) (Peroxisome proliferator-activated receptor-binding protein) (PBP) (PPAR-binding protein) (Thyroid hormone receptor-associated protein complex 220 kDa component) (Trap220) (Thyroid receptor-interacting protein 2) (TR-interacting protein 2) (TRIP-2) (Vitamin D receptor-interacting protein complex component DRIP205) (p53 regulatory protein RB18A) Mediator complex subunit 1 |
Synonyms | CRSP1 DRIP230 PPARBP DRIP205 CRSP200 TRAP220 RB18A PPARGBP TRIP2 PBP ARC205 |
Description | FUNCTION: Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors . Acts as a coactivator for GATA1-mediated transcriptional activation during erythroid differentiation of K562 erythroleukemia cells . . |
Accessions | Q15648 ENST00000300651.11 [Q15648-1] J3KSD7 ENST00000581334.1 ENST00000394287.7 [Q15648-3] J3QKZ7 ENST00000577831.5 |