Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 43 studies | 48% ± 24% | |
astrocyte | 18 studies | 52% ± 18% | |
oligodendrocyte | 15 studies | 57% ± 14% | |
oligodendrocyte precursor cell | 15 studies | 57% ± 19% | |
endothelial cell of lymphatic vessel | 14 studies | 57% ± 32% | |
microglial cell | 13 studies | 33% ± 17% | |
smooth muscle cell | 12 studies | 44% ± 18% | |
glutamatergic neuron | 12 studies | 70% ± 21% | |
GABAergic neuron | 11 studies | 71% ± 24% | |
pericyte | 11 studies | 35% ± 12% | |
fibroblast | 11 studies | 31% ± 16% | |
adipocyte | 10 studies | 60% ± 16% | |
type I pneumocyte | 9 studies | 62% ± 32% | |
capillary endothelial cell | 9 studies | 31% ± 15% | |
neuron | 8 studies | 54% ± 26% | |
epithelial cell | 8 studies | 56% ± 21% | |
mesothelial cell | 8 studies | 45% ± 20% | |
vein endothelial cell | 8 studies | 47% ± 30% | |
endothelial cell of artery | 7 studies | 40% ± 24% | |
amacrine cell | 7 studies | 48% ± 22% | |
ciliated cell | 7 studies | 56% ± 24% | |
basal cell | 7 studies | 45% ± 25% | |
interneuron | 6 studies | 84% ± 10% | |
retinal ganglion cell | 6 studies | 79% ± 21% | |
retina horizontal cell | 6 studies | 82% ± 20% | |
retinal cone cell | 6 studies | 47% ± 23% | |
cardiac muscle cell | 6 studies | 77% ± 16% | |
club cell | 6 studies | 54% ± 26% | |
retinal bipolar neuron | 5 studies | 48% ± 25% | |
macrophage | 5 studies | 28% ± 16% | |
type II pneumocyte | 5 studies | 75% ± 11% | |
cholangiocyte | 4 studies | 83% ± 8% | |
hepatocyte | 4 studies | 79% ± 19% | |
granule cell | 4 studies | 72% ± 12% | |
Mueller cell | 4 studies | 60% ± 20% | |
OFF-bipolar cell | 4 studies | 67% ± 28% | |
ON-bipolar cell | 4 studies | 65% ± 28% | |
retinal rod cell | 4 studies | 35% ± 22% | |
endothelial cell of vascular tree | 4 studies | 63% ± 28% | |
goblet cell | 4 studies | 41% ± 28% | |
renal alpha-intercalated cell | 4 studies | 65% ± 35% | |
ionocyte | 3 studies | 20% ± 4% | |
endothelial cell of sinusoid | 3 studies | 51% ± 8% | |
hepatic stellate cell | 3 studies | 47% ± 24% | |
differentiation-committed oligodendrocyte precursor | 3 studies | 52% ± 12% | |
GABAergic interneuron | 3 studies | 84% ± 6% | |
Purkinje cell | 3 studies | 76% ± 15% | |
glial cell | 3 studies | 45% ± 20% | |
GABAergic amacrine cell | 3 studies | 57% ± 15% | |
glycinergic amacrine cell | 3 studies | 78% ± 8% | |
rod bipolar cell | 3 studies | 59% ± 23% | |
connective tissue cell | 3 studies | 29% ± 11% | |
ependymal cell | 3 studies | 66% ± 10% | |
respiratory goblet cell | 3 studies | 60% ± 24% | |
muscle cell | 3 studies | 28% ± 13% | |
mucus secreting cell | 3 studies | 67% ± 10% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 2551.25 | 245 / 245 | 100% | 13.13 | 501 / 502 |
breast | 100% | 4412.06 | 459 / 459 | 98% | 14.07 | 1091 / 1118 |
brain | 99% | 3059.39 | 2614 / 2642 | 99% | 18.34 | 695 / 705 |
stomach | 100% | 3367.48 | 359 / 359 | 97% | 13.28 | 277 / 286 |
thymus | 100% | 4815.52 | 653 / 653 | 96% | 14.88 | 578 / 605 |
intestine | 100% | 2846.54 | 966 / 966 | 95% | 9.81 | 503 / 527 |
pancreas | 100% | 2275.27 | 328 / 328 | 94% | 11.60 | 168 / 178 |
liver | 100% | 2341.16 | 226 / 226 | 93% | 8.07 | 378 / 406 |
esophagus | 100% | 1982.97 | 1445 / 1445 | 92% | 13.33 | 169 / 183 |
kidney | 100% | 2760.16 | 89 / 89 | 91% | 11.35 | 823 / 901 |
lung | 100% | 2949.02 | 577 / 578 | 79% | 7.13 | 918 / 1155 |
bladder | 100% | 1765.33 | 21 / 21 | 79% | 6.72 | 399 / 504 |
uterus | 100% | 2127.31 | 170 / 170 | 66% | 5.28 | 301 / 459 |
adrenal gland | 100% | 1619.80 | 258 / 258 | 65% | 4.46 | 149 / 230 |
ovary | 70% | 828.16 | 126 / 180 | 93% | 10.76 | 402 / 430 |
skin | 100% | 3210.04 | 1809 / 1809 | 20% | 1.53 | 96 / 472 |
adipose | 100% | 3511.04 | 1204 / 1204 | 0% | 0 | 0 / 0 |
spleen | 100% | 4164.57 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 4.50 | 1 / 1 |
blood vessel | 100% | 2508.05 | 1333 / 1335 | 0% | 0 | 0 / 0 |
heart | 97% | 2035.47 | 837 / 861 | 0% | 0 | 0 / 0 |
muscle | 70% | 632.16 | 564 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 62% | 3.87 | 28 / 45 |
lymph node | 0% | 0 | 0 / 0 | 7% | 0.24 | 2 / 29 |
eye | 0% | 0 | 0 / 0 | 5% | 0.22 | 4 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007165 | Biological process | signal transduction |
GO_0007155 | Biological process | cell adhesion |
GO_0022409 | Biological process | positive regulation of cell-cell adhesion |
GO_0065003 | Biological process | protein-containing complex assembly |
GO_0007166 | Biological process | cell surface receptor signaling pathway |
GO_0005911 | Cellular component | cell-cell junction |
GO_0042995 | Cellular component | cell projection |
GO_0005730 | Cellular component | nucleolus |
GO_0030054 | Cellular component | cell junction |
GO_0005654 | Cellular component | nucleoplasm |
GO_0071944 | Cellular component | cell periphery |
GO_0005912 | Cellular component | adherens junction |
GO_0005886 | Cellular component | plasma membrane |
GO_0005737 | Cellular component | cytoplasm |
GO_0005923 | Cellular component | bicellular tight junction |
GO_0051393 | Molecular function | alpha-actinin binding |
GO_0005524 | Molecular function | ATP binding |
GO_0005515 | Molecular function | protein binding |
Gene name | MAGI1 |
Protein name | Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 (Atrophin-1-interacting protein 3) (AIP-3) (BAI1-associated protein 1) (BAP-1) (Membrane-associated guanylate kinase inverted 1) (MAGI-1) (Trinucleotide repeat-containing gene 19 protein) (WW domain-containing protein 3) (WWP3) Membrane associated guanylate kinase, WW and PDZ domain containing 1 |
Synonyms | TNRC19 BAIAP1 AIP3 BAP1 |
Description | FUNCTION: May play a role as scaffolding protein at cell-cell junctions. May regulate acid-induced ASIC3 currents by modulating its expression at the cell surface (By similarity). . |
Accessions | ENST00000497477.6 [Q96QZ7-4] H7C4S7 ENST00000472257.5 ENST00000460329.6 H7C535 H7C5T8 ENST00000463103.6 Q96QZ7 A0A087WT53 ENST00000621418.4 ENST00000611645.4 ENST00000402939.7 [Q96QZ7-2] A0A087WXD2 ENST00000479287.1 H7C4U7 ENST00000330909.12 [Q96QZ7-5] ENST00000483466.5 [Q96QZ7-3] |