HMGN4 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
CD8-positive, alpha-beta T cell	12 studies	21% ± 4%	Explore
regulatory T cell	12 studies	23% ± 5%	Explore
natural killer cell	11 studies	21% ± 5%	Explore
CD4-positive, alpha-beta T cell	10 studies	20% ± 3%	Explore
naive B cell	9 studies	18% ± 2%	Explore
gamma-delta T cell	9 studies	21% ± 4%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	8 studies	21% ± 5%	Explore
mucosal invariant T cell	8 studies	23% ± 4%	Explore
CD16-positive, CD56-dim natural killer cell, human	7 studies	24% ± 4%	Explore
B cell	7 studies	22% ± 3%	Explore
CD16-negative, CD56-bright natural killer cell, human	6 studies	22% ± 4%	Explore
memory B cell	6 studies	21% ± 5%	Explore
CD4-positive, alpha-beta memory T cell	5 studies	23% ± 4%	Explore
T follicular helper cell	5 studies	19% ± 3%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	5 studies	21% ± 3%	Explore
CD8-positive, alpha-beta memory T cell	5 studies	25% ± 9%	Explore
plasmacytoid dendritic cell	5 studies	21% ± 4%	Explore
mature NK T cell	5 studies	24% ± 5%	Explore
effector CD4-positive, alpha-beta T cell	4 studies	23% ± 2%	Explore
effector CD8-positive, alpha-beta T cell	4 studies	24% ± 4%	Explore
exhausted T cell	3 studies	24% ± 1%	Explore
double negative thymocyte	3 studies	21% ± 3%	Explore
effector memory CD8-positive, alpha-beta T cell	3 studies	27% ± 5%	Explore
effector memory CD4-positive, alpha-beta T cell	3 studies	21% ± 0%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
peripheral blood	5 studies	20% ± 1%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	2240.91	1445 / 1445	100%	92.72	183 / 183
lung	100%	2083.33	578 / 578	100%	124.67	1155 / 1155
ovary	100%	2306.31	180 / 180	100%	112.25	430 / 430
bladder	100%	2608.71	21 / 21	100%	143.18	503 / 504
breast	100%	2270.77	459 / 459	100%	141.65	1115 / 1118
thymus	100%	2194.64	653 / 653	100%	159.30	603 / 605
intestine	100%	2760.03	966 / 966	100%	135.73	525 / 527
prostate	100%	2085.16	245 / 245	100%	95.84	500 / 502
kidney	100%	1949.30	89 / 89	99%	116.15	896 / 901
uterus	100%	2891.66	170 / 170	99%	129.24	456 / 459
skin	100%	2261.51	1808 / 1809	99%	145.06	466 / 472
adrenal gland	100%	1889.30	258 / 258	98%	93.60	225 / 230
stomach	97%	1391.75	347 / 359	100%	113.84	285 / 286
brain	96%	994.71	2544 / 2642	100%	113.49	705 / 705
pancreas	96%	840.13	315 / 328	99%	118.36	176 / 178
liver	57%	307.98	128 / 226	89%	51.89	363 / 406
adipose	100%	2208.51	1204 / 1204	0%	0	0 / 0
blood vessel	100%	2718.31	1335 / 1335	0%	0	0 / 0
lymph node	0%	0	0 / 0	100%	141.60	29 / 29
spleen	100%	2500.50	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	114.61	45 / 45
ureter	0%	0	0 / 0	100%	118.08	1 / 1
muscle	99%	1249.35	796 / 803	0%	0	0 / 0
heart	95%	1146.49	815 / 861	0%	0	0 / 0
peripheral blood	95%	2105.66	878 / 929	0%	0	0 / 0
eye	0%	0	0 / 0	93%	74.09	74 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0