Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 6 studies | 20% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
lung | 99% | 2814.46 | 571 / 578 | 69% | 24.23 | 792 / 1155 |
thymus | 88% | 1733.92 | 572 / 653 | 77% | 30.63 | 464 / 605 |
uterus | 91% | 1607.75 | 154 / 170 | 70% | 26.71 | 323 / 459 |
esophagus | 81% | 1173.41 | 1164 / 1445 | 79% | 32.63 | 145 / 183 |
prostate | 93% | 1827.15 | 229 / 245 | 66% | 17.84 | 329 / 502 |
breast | 90% | 1775.19 | 411 / 459 | 68% | 21.80 | 762 / 1118 |
intestine | 89% | 2234.87 | 863 / 966 | 67% | 23.97 | 355 / 527 |
kidney | 83% | 1571.09 | 74 / 89 | 73% | 32.91 | 657 / 901 |
bladder | 86% | 1136.33 | 18 / 21 | 66% | 24.71 | 332 / 504 |
stomach | 77% | 1045.38 | 276 / 359 | 74% | 28.95 | 212 / 286 |
ovary | 92% | 2357.94 | 166 / 180 | 58% | 13.16 | 248 / 430 |
skin | 81% | 1437.62 | 1472 / 1809 | 62% | 25.72 | 293 / 472 |
liver | 70% | 848.93 | 158 / 226 | 65% | 14.77 | 265 / 406 |
adrenal gland | 75% | 1193.26 | 194 / 258 | 57% | 10.61 | 132 / 230 |
pancreas | 48% | 332.04 | 157 / 328 | 71% | 25.77 | 127 / 178 |
brain | 40% | 252.58 | 1044 / 2642 | 62% | 12.51 | 434 / 705 |
lymph node | 0% | 0 | 0 / 0 | 100% | 50.64 | 29 / 29 |
spleen | 100% | 5107.90 | 241 / 241 | 0% | 0 | 0 / 0 |
adipose | 89% | 2214.24 | 1076 / 1204 | 0% | 0 | 0 / 0 |
peripheral blood | 88% | 2809.26 | 815 / 929 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 76% | 36.81 | 34 / 45 |
blood vessel | 74% | 1187.01 | 988 / 1335 | 0% | 0 | 0 / 0 |
heart | 70% | 752.42 | 602 / 861 | 0% | 0 | 0 / 0 |
muscle | 45% | 296.82 | 364 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 14% | 2.61 | 11 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0008217 | Biological process | regulation of blood pressure |
GO_0002250 | Biological process | adaptive immune response |
GO_0002474 | Biological process | antigen processing and presentation of peptide antigen via MHC class I |
GO_0043171 | Biological process | peptide catabolic process |
GO_0006508 | Biological process | proteolysis |
GO_0019885 | Biological process | antigen processing and presentation of endogenous peptide antigen via MHC class I |
GO_0005615 | Cellular component | extracellular space |
GO_0005737 | Cellular component | cytoplasm |
GO_0005788 | Cellular component | endoplasmic reticulum lumen |
GO_0016020 | Cellular component | membrane |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0042277 | Molecular function | peptide binding |
GO_0004175 | Molecular function | endopeptidase activity |
GO_0005515 | Molecular function | protein binding |
GO_0008270 | Molecular function | zinc ion binding |
GO_0008237 | Molecular function | metallopeptidase activity |
GO_0070006 | Molecular function | metalloaminopeptidase activity |
GO_0004177 | Molecular function | aminopeptidase activity |
Gene name | ERAP2 |
Protein name | Endoplasmic reticulum aminopeptidase 2 (EC 3.4.11.-) (Leukocyte-derived arginine aminopeptidase) (L-RAP) Endoplasmic reticulum aminopeptidase 2 |
Synonyms | LRAP |
Description | FUNCTION: Aminopeptidase that plays a central role in peptide trimming, a step required for the generation of most HLA class I-binding peptides. Peptide trimming is essential to customize longer precursor peptides to fit them to the correct length required for presentation on MHC class I molecules. Preferentially hydrolyzes the basic residues Arg and Lys. . |
Accessions | ENST00000510373.6 [Q6P179-1] ENST00000513084.5 [Q6P179-2] ENST00000437043.8 [Q6P179-1] ENST00000510373.5 D6RF46 H0YAL8 ENST00000512869.1 D6RGW0 ENST00000510309.1 [Q6P179-4] ENST00000508077.1 ENST00000379904.8 [Q6P179-3] H0Y9X9 ENST00000507346.1 Q6P179 |