Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 23 studies | 44% ± 17% | |
astrocyte | 19 studies | 54% ± 21% | |
oligodendrocyte | 16 studies | 48% ± 18% | |
oligodendrocyte precursor cell | 15 studies | 55% ± 20% | |
microglial cell | 14 studies | 51% ± 13% | |
glutamatergic neuron | 13 studies | 64% ± 24% | |
macrophage | 12 studies | 40% ± 19% | |
GABAergic neuron | 11 studies | 63% ± 22% | |
fibroblast | 11 studies | 40% ± 16% | |
smooth muscle cell | 10 studies | 31% ± 11% | |
pericyte | 9 studies | 39% ± 18% | |
adipocyte | 9 studies | 47% ± 14% | |
CD16-negative, CD56-bright natural killer cell, human | 8 studies | 28% ± 16% | |
neuron | 8 studies | 54% ± 23% | |
epithelial cell | 8 studies | 39% ± 22% | |
mast cell | 8 studies | 27% ± 9% | |
interneuron | 7 studies | 64% ± 24% | |
natural killer cell | 7 studies | 33% ± 12% | |
retinal ganglion cell | 6 studies | 54% ± 17% | |
retina horizontal cell | 6 studies | 59% ± 26% | |
retinal cone cell | 6 studies | 55% ± 27% | |
ciliated cell | 6 studies | 31% ± 12% | |
T cell | 6 studies | 29% ± 8% | |
endothelial cell of lymphatic vessel | 6 studies | 38% ± 15% | |
amacrine cell | 5 studies | 55% ± 23% | |
cardiac muscle cell | 5 studies | 52% ± 16% | |
mesothelial cell | 5 studies | 37% ± 12% | |
Mueller cell | 5 studies | 53% ± 24% | |
retinal rod cell | 5 studies | 64% ± 23% | |
myeloid cell | 5 studies | 31% ± 11% | |
monocyte | 5 studies | 33% ± 7% | |
basal cell | 5 studies | 46% ± 24% | |
type I pneumocyte | 5 studies | 30% ± 10% | |
type II pneumocyte | 5 studies | 28% ± 9% | |
glial cell | 4 studies | 37% ± 15% | |
granule cell | 4 studies | 62% ± 7% | |
retinal bipolar neuron | 4 studies | 37% ± 22% | |
B cell | 4 studies | 27% ± 10% | |
CD4-positive, alpha-beta T cell | 4 studies | 26% ± 7% | |
dendritic cell | 4 studies | 27% ± 4% | |
club cell | 4 studies | 35% ± 9% | |
endothelial cell of sinusoid | 3 studies | 30% ± 14% | |
differentiation-committed oligodendrocyte precursor | 3 studies | 57% ± 9% | |
GABAergic interneuron | 3 studies | 65% ± 6% | |
progenitor cell | 3 studies | 49% ± 12% | |
plasma cell | 3 studies | 35% ± 9% | |
CD8-positive, alpha-beta T cell | 3 studies | 29% ± 6% | |
vein endothelial cell | 3 studies | 44% ± 23% | |
GABAergic amacrine cell | 3 studies | 67% ± 14% | |
OFF-bipolar cell | 3 studies | 56% ± 23% | |
ON-bipolar cell | 3 studies | 56% ± 22% | |
glycinergic amacrine cell | 3 studies | 57% ± 11% | |
endothelial cell of vascular tree | 3 studies | 43% ± 22% | |
hepatocyte | 3 studies | 66% ± 19% | |
mature NK T cell | 3 studies | 31% ± 18% | |
retinal pigment epithelial cell | 3 studies | 41% ± 29% | |
abnormal cell | 3 studies | 36% ± 22% | |
ependymal cell | 3 studies | 61% ± 18% | |
alveolar macrophage | 3 studies | 38% ± 9% | |
capillary endothelial cell | 3 studies | 32% ± 8% | |
respiratory goblet cell | 3 studies | 35% ± 12% | |
lymphocyte | 3 studies | 49% ± 19% | |
leukocyte | 3 studies | 52% ± 6% | |
kidney distal convoluted tubule epithelial cell | 3 studies | 48% ± 22% | |
mucus secreting cell | 3 studies | 39% ± 7% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 5193.04 | 1445 / 1445 | 100% | 31.88 | 183 / 183 |
brain | 100% | 6341.08 | 2638 / 2642 | 100% | 40.75 | 705 / 705 |
prostate | 100% | 4560.00 | 245 / 245 | 100% | 18.63 | 501 / 502 |
skin | 100% | 5827.89 | 1809 / 1809 | 100% | 29.48 | 471 / 472 |
breast | 100% | 5113.88 | 459 / 459 | 100% | 21.99 | 1113 / 1118 |
intestine | 100% | 4550.14 | 966 / 966 | 99% | 14.37 | 524 / 527 |
thymus | 100% | 5276.07 | 653 / 653 | 99% | 22.72 | 601 / 605 |
lung | 100% | 4137.04 | 576 / 578 | 99% | 23.71 | 1148 / 1155 |
bladder | 100% | 4734.67 | 21 / 21 | 99% | 15.66 | 499 / 504 |
kidney | 100% | 3392.87 | 89 / 89 | 99% | 23.13 | 891 / 901 |
ovary | 100% | 5116.32 | 180 / 180 | 99% | 17.34 | 425 / 430 |
stomach | 100% | 3202.12 | 359 / 359 | 99% | 16.12 | 282 / 286 |
pancreas | 99% | 2268.87 | 326 / 328 | 99% | 15.51 | 176 / 178 |
uterus | 100% | 5105.04 | 170 / 170 | 98% | 19.38 | 450 / 459 |
adrenal gland | 100% | 4950.81 | 258 / 258 | 97% | 23.36 | 223 / 230 |
liver | 100% | 2434.41 | 226 / 226 | 89% | 9.76 | 361 / 406 |
adipose | 100% | 5219.58 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 5313.57 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 14.04 | 29 / 29 |
muscle | 100% | 7621.46 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 4629.14 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 23.04 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 7.56 | 1 / 1 |
eye | 0% | 0 | 0 / 0 | 99% | 17.83 | 79 / 80 |
heart | 98% | 4433.22 | 843 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 92% | 3336.68 | 856 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_1903690 | Biological process | negative regulation of wound healing, spreading of epidermal cells |
GO_0090091 | Biological process | positive regulation of extracellular matrix disassembly |
GO_0007052 | Biological process | mitotic spindle organization |
GO_0007163 | Biological process | establishment or maintenance of cell polarity |
GO_0010470 | Biological process | regulation of gastrulation |
GO_0051301 | Biological process | cell division |
GO_0007020 | Biological process | microtubule nucleation |
GO_0031111 | Biological process | negative regulation of microtubule polymerization or depolymerization |
GO_0034453 | Biological process | microtubule anchoring |
GO_0040001 | Biological process | establishment of mitotic spindle localization |
GO_0007026 | Biological process | negative regulation of microtubule depolymerization |
GO_0031116 | Biological process | positive regulation of microtubule polymerization |
GO_0090307 | Biological process | mitotic spindle assembly |
GO_0007030 | Biological process | Golgi organization |
GO_0006903 | Biological process | vesicle targeting |
GO_0010458 | Biological process | exit from mitosis |
GO_0051893 | Biological process | regulation of focal adhesion assembly |
GO_0000226 | Biological process | microtubule cytoskeleton organization |
GO_0051294 | Biological process | establishment of spindle orientation |
GO_1904261 | Biological process | positive regulation of basement membrane assembly involved in embryonic body morphogenesis |
GO_0030953 | Biological process | astral microtubule organization |
GO_0070507 | Biological process | regulation of microtubule cytoskeleton organization |
GO_0010717 | Biological process | regulation of epithelial to mesenchymal transition |
GO_0031023 | Biological process | microtubule organizing center organization |
GO_0001578 | Biological process | microtubule bundle formation |
GO_0045921 | Biological process | positive regulation of exocytosis |
GO_0010634 | Biological process | positive regulation of epithelial cell migration |
GO_0051497 | Biological process | negative regulation of stress fiber assembly |
GO_0005876 | Cellular component | spindle microtubule |
GO_0072686 | Cellular component | mitotic spindle |
GO_0016020 | Cellular component | membrane |
GO_0031592 | Cellular component | centrosomal corona |
GO_0005813 | Cellular component | centrosome |
GO_0000776 | Cellular component | kinetochore |
GO_0005815 | Cellular component | microtubule organizing center |
GO_0035371 | Cellular component | microtubule plus-end |
GO_0045180 | Cellular component | basal cortex |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0005925 | Cellular component | focal adhesion |
GO_0030981 | Cellular component | cortical microtubule cytoskeleton |
GO_0005829 | Cellular component | cytosol |
GO_0005828 | Cellular component | kinetochore microtubule |
GO_0005938 | Cellular component | cell cortex |
GO_0005881 | Cellular component | cytoplasmic microtubule |
GO_0051010 | Molecular function | microtubule plus-end binding |
GO_0002162 | Molecular function | dystroglycan binding |
GO_0043515 | Molecular function | kinetochore binding |
GO_0008017 | Molecular function | microtubule binding |
GO_0005515 | Molecular function | protein binding |
Gene name | CLASP1 |
Protein name | Cytoplasmic linker associated protein 1 CLIP-associating protein 1 (Cytoplasmic linker-associated protein 1) (Multiple asters homolog 1) (Protein Orbit homolog 1) (hOrbit1) |
Synonyms | KIAA0622 MAST1 |
Description | FUNCTION: Microtubule plus-end tracking protein that promotes the stabilization of dynamic microtubules. Involved in the nucleation of noncentrosomal microtubules originating from the trans-Golgi network (TGN). Required for the polarization of the cytoplasmic microtubule arrays in migrating cells towards the leading edge of the cell. May act at the cell cortex to enhance the frequency of rescue of depolymerizing microtubules by attaching their plus-ends to cortical platforms composed of ERC1 and PHLDB2. This cortical microtubule stabilizing activity is regulated at least in part by phosphatidylinositol 3-kinase signaling. Also performs a similar stabilizing function at the kinetochore which is essential for the bipolar alignment of chromosomes on the mitotic spindle. . |
Accessions | C9JP76 ENST00000418989.5 ENST00000455322.7 ENST00000696935.1 ENST00000409078.8 [Q7Z460-2] Q7Z460 C9J151 ENST00000263710.8 [Q7Z460-1] A0A8V8TLP7 ENST00000700755.1 F8WA11 ENST00000541377.5 [Q7Z460-4] H0Y5T1 ENST00000452274.7 ENST00000700754.1 A0A8V8TQK9 ENST00000449975.1 A0A8V8TRF6 |