Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 12 studies | 31% ± 15% | |
astrocyte | 12 studies | 31% ± 13% | |
oligodendrocyte precursor cell | 10 studies | 34% ± 18% | |
oligodendrocyte | 10 studies | 30% ± 12% | |
B cell | 8 studies | 18% ± 4% | |
GABAergic neuron | 8 studies | 39% ± 20% | |
glutamatergic neuron | 8 studies | 39% ± 25% | |
microglial cell | 8 studies | 29% ± 10% | |
adipocyte | 8 studies | 39% ± 14% | |
macrophage | 7 studies | 32% ± 11% | |
fibroblast | 7 studies | 29% ± 15% | |
ciliated cell | 7 studies | 25% ± 8% | |
interneuron | 6 studies | 39% ± 24% | |
epithelial cell | 5 studies | 36% ± 15% | |
retina horizontal cell | 5 studies | 28% ± 11% | |
retinal cone cell | 5 studies | 22% ± 10% | |
naive thymus-derived CD4-positive, alpha-beta T cell | 5 studies | 19% ± 3% | |
T cell | 5 studies | 19% ± 2% | |
endothelial cell of lymphatic vessel | 5 studies | 25% ± 9% | |
type II pneumocyte | 5 studies | 21% ± 6% | |
neuron | 4 studies | 30% ± 14% | |
mucosal invariant T cell | 4 studies | 18% ± 3% | |
myeloid cell | 4 studies | 21% ± 1% | |
CD4-positive, alpha-beta T cell | 4 studies | 18% ± 2% | |
cardiac muscle cell | 4 studies | 32% ± 3% | |
mast cell | 4 studies | 20% ± 5% | |
lymphocyte | 4 studies | 22% ± 10% | |
Mueller cell | 4 studies | 26% ± 13% | |
retinal rod cell | 4 studies | 31% ± 11% | |
monocyte | 4 studies | 19% ± 2% | |
pericyte | 4 studies | 26% ± 11% | |
smooth muscle cell | 4 studies | 25% ± 5% | |
type I pneumocyte | 4 studies | 23% ± 6% | |
GABAergic interneuron | 3 studies | 21% ± 3% | |
naive B cell | 3 studies | 20% ± 2% | |
plasma cell | 3 studies | 28% ± 8% | |
amacrine cell | 3 studies | 29% ± 10% | |
rod bipolar cell | 3 studies | 26% ± 11% | |
hepatocyte | 3 studies | 40% ± 20% | |
alveolar macrophage | 3 studies | 24% ± 7% | |
club cell | 3 studies | 23% ± 10% | |
CD8-positive, alpha-beta memory T cell | 3 studies | 16% ± 1% | |
gamma-delta T cell | 3 studies | 19% ± 2% | |
regulatory T cell | 3 studies | 18% ± 1% | |
basal cell | 3 studies | 35% ± 20% | |
goblet cell | 3 studies | 35% ± 24% | |
granule cell | 3 studies | 23% ± 7% | |
plasmacytoid dendritic cell | 3 studies | 17% ± 1% | |
naive thymus-derived CD8-positive, alpha-beta T cell | 3 studies | 18% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2567.88 | 1445 / 1445 | 100% | 19.97 | 183 / 183 |
breast | 100% | 2976.24 | 459 / 459 | 100% | 30.22 | 1117 / 1118 |
bladder | 100% | 2641.81 | 21 / 21 | 100% | 18.62 | 503 / 504 |
ovary | 100% | 3689.65 | 180 / 180 | 100% | 18.45 | 429 / 430 |
lung | 100% | 2329.07 | 577 / 578 | 100% | 18.49 | 1153 / 1155 |
prostate | 100% | 2414.59 | 245 / 245 | 100% | 24.57 | 500 / 502 |
thymus | 100% | 3510.61 | 653 / 653 | 100% | 29.71 | 602 / 605 |
stomach | 100% | 2074.57 | 359 / 359 | 99% | 19.61 | 284 / 286 |
pancreas | 100% | 1408.32 | 327 / 328 | 99% | 16.98 | 177 / 178 |
intestine | 100% | 2801.28 | 966 / 966 | 99% | 17.96 | 522 / 527 |
uterus | 100% | 3457.35 | 170 / 170 | 99% | 17.96 | 454 / 459 |
brain | 99% | 1516.26 | 2608 / 2642 | 100% | 22.69 | 705 / 705 |
adrenal gland | 100% | 2287.18 | 258 / 258 | 98% | 17.99 | 226 / 230 |
liver | 100% | 1195.74 | 226 / 226 | 97% | 11.64 | 395 / 406 |
kidney | 100% | 1627.16 | 89 / 89 | 97% | 15.03 | 875 / 901 |
skin | 100% | 2510.02 | 1809 / 1809 | 96% | 20.44 | 452 / 472 |
adipose | 100% | 2772.00 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 3165.47 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 12.83 | 29 / 29 |
muscle | 100% | 3261.08 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 1642.91 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 17.78 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 7.10 | 1 / 1 |
heart | 95% | 1542.26 | 817 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 74% | 7.81 | 59 / 80 |
peripheral blood | 58% | 737.29 | 536 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006508 | Biological process | proteolysis |
GO_0097264 | Biological process | self proteolysis |
GO_0010634 | Biological process | positive regulation of epithelial cell migration |
GO_0005813 | Cellular component | centrosome |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005829 | Cellular component | cytosol |
GO_0005634 | Cellular component | nucleus |
GO_0004198 | Molecular function | calcium-dependent cysteine-type endopeptidase activity |
GO_0004175 | Molecular function | endopeptidase activity |
GO_0004197 | Molecular function | cysteine-type endopeptidase activity |
GO_0090541 | Molecular function | MIT domain binding |
GO_0005515 | Molecular function | protein binding |
Gene name | CAPN7 |
Protein name | Calpain 7 Calpain-7 (EC 3.4.22.-) (PalB homolog) (PalBH) |
Synonyms | PALBH |
Description | FUNCTION: Calcium-regulated non-lysosomal thiol-protease. . |
Accessions | ENST00000253693.7 F8WDQ3 ENST00000415565.1 H7C0F1 Q7Z479 ENST00000418994.1 F8WCZ1 ENST00000443567.5 ENST00000457023.1 H7C1B7 Q9Y6W3 |