Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 20 studies | 45% ± 16% | |
astrocyte | 19 studies | 46% ± 18% | |
glutamatergic neuron | 13 studies | 61% ± 26% | |
oligodendrocyte precursor cell | 13 studies | 41% ± 14% | |
oligodendrocyte | 13 studies | 38% ± 13% | |
macrophage | 12 studies | 37% ± 13% | |
microglial cell | 12 studies | 42% ± 13% | |
fibroblast | 12 studies | 37% ± 10% | |
smooth muscle cell | 12 studies | 33% ± 13% | |
GABAergic neuron | 11 studies | 54% ± 22% | |
pericyte | 11 studies | 41% ± 13% | |
mast cell | 9 studies | 35% ± 10% | |
adipocyte | 9 studies | 43% ± 10% | |
B cell | 8 studies | 34% ± 9% | |
ciliated cell | 8 studies | 43% ± 29% | |
neuron | 7 studies | 48% ± 21% | |
endothelial cell of lymphatic vessel | 7 studies | 35% ± 13% | |
epithelial cell | 6 studies | 48% ± 18% | |
interneuron | 6 studies | 59% ± 18% | |
myeloid cell | 6 studies | 39% ± 11% | |
mesothelial cell | 6 studies | 45% ± 10% | |
T cell | 6 studies | 39% ± 15% | |
type II pneumocyte | 6 studies | 68% ± 25% | |
monocyte | 6 studies | 41% ± 14% | |
cardiac muscle cell | 5 studies | 53% ± 15% | |
dendritic cell | 5 studies | 39% ± 8% | |
club cell | 5 studies | 54% ± 23% | |
type I pneumocyte | 5 studies | 65% ± 7% | |
granule cell | 4 studies | 47% ± 27% | |
plasma cell | 4 studies | 40% ± 13% | |
CD4-positive, alpha-beta T cell | 4 studies | 30% ± 8% | |
Mueller cell | 4 studies | 33% ± 7% | |
amacrine cell | 4 studies | 31% ± 6% | |
retina horizontal cell | 4 studies | 30% ± 8% | |
retinal cone cell | 4 studies | 59% ± 12% | |
retinal ganglion cell | 4 studies | 33% ± 13% | |
retinal rod cell | 4 studies | 29% ± 10% | |
basal cell | 4 studies | 50% ± 15% | |
natural killer cell | 4 studies | 33% ± 4% | |
hepatic stellate cell | 3 studies | 42% ± 20% | |
GABAergic interneuron | 3 studies | 53% ± 2% | |
progenitor cell | 3 studies | 35% ± 7% | |
CD8-positive, alpha-beta T cell | 3 studies | 30% ± 6% | |
GABAergic amacrine cell | 3 studies | 38% ± 5% | |
glycinergic amacrine cell | 3 studies | 27% ± 6% | |
endothelial cell of vascular tree | 3 studies | 29% ± 7% | |
hepatocyte | 3 studies | 52% ± 20% | |
retinal pigment epithelial cell | 3 studies | 46% ± 22% | |
ependymal cell | 3 studies | 64% ± 12% | |
alveolar macrophage | 3 studies | 46% ± 8% | |
capillary endothelial cell | 3 studies | 36% ± 6% | |
respiratory goblet cell | 3 studies | 44% ± 17% | |
lymphocyte | 3 studies | 46% ± 8% | |
leukocyte | 3 studies | 50% ± 11% | |
mucus secreting cell | 3 studies | 37% ± 5% | |
regulatory T cell | 3 studies | 31% ± 7% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 1345.90 | 245 / 245 | 100% | 14.43 | 502 / 502 |
thymus | 100% | 1235.55 | 652 / 653 | 100% | 10.51 | 605 / 605 |
skin | 100% | 1625.80 | 1808 / 1809 | 100% | 14.44 | 471 / 472 |
breast | 100% | 942.42 | 459 / 459 | 100% | 11.92 | 1115 / 1118 |
brain | 100% | 3121.37 | 2641 / 2642 | 100% | 13.80 | 703 / 705 |
intestine | 100% | 1342.25 | 966 / 966 | 99% | 8.06 | 523 / 527 |
bladder | 100% | 1349.52 | 21 / 21 | 99% | 8.04 | 499 / 504 |
stomach | 100% | 958.69 | 359 / 359 | 99% | 8.61 | 283 / 286 |
kidney | 100% | 1240.47 | 89 / 89 | 99% | 8.80 | 891 / 901 |
esophagus | 100% | 1275.06 | 1443 / 1445 | 99% | 8.34 | 181 / 183 |
lung | 100% | 2024.30 | 578 / 578 | 98% | 13.78 | 1137 / 1155 |
adrenal gland | 100% | 1567.43 | 258 / 258 | 98% | 10.25 | 225 / 230 |
ovary | 100% | 1638.97 | 180 / 180 | 97% | 7.61 | 417 / 430 |
uterus | 100% | 1295.48 | 170 / 170 | 96% | 7.15 | 442 / 459 |
pancreas | 96% | 635.99 | 316 / 328 | 99% | 8.24 | 176 / 178 |
liver | 88% | 419.24 | 200 / 226 | 79% | 3.66 | 319 / 406 |
adipose | 100% | 939.07 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 24.13 | 80 / 80 |
spleen | 100% | 1120.93 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 7.37 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 3.89 | 1 / 1 |
blood vessel | 100% | 1417.28 | 1334 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 896.88 | 800 / 803 | 0% | 0 | 0 / 0 |
heart | 97% | 1498.38 | 834 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 97% | 5.46 | 28 / 29 |
peripheral blood | 90% | 680.40 | 839 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0008344 | Biological process | adult locomotory behavior |
GO_0042748 | Biological process | circadian sleep/wake cycle, non-REM sleep |
GO_0048512 | Biological process | circadian behavior |
GO_0042428 | Biological process | serotonin metabolic process |
GO_0060586 | Biological process | multicellular organismal-level iron ion homeostasis |
GO_0050804 | Biological process | modulation of chemical synaptic transmission |
GO_0050951 | Biological process | sensory perception of temperature stimulus |
GO_1900242 | Biological process | regulation of synaptic vesicle endocytosis |
GO_0007616 | Biological process | long-term memory |
GO_0098978 | Cellular component | glutamatergic synapse |
GO_0005737 | Cellular component | cytoplasm |
Gene name | BTBD9 |
Protein name | BTB domain containing 9 BTB/POZ domain-containing protein 9 |
Synonyms | KIAA1880 |
Description | |
Accessions | ENST00000419706.6 [Q96Q07-2] ENST00000649492.1 [Q96Q07-1] H7C5Z6 C9JVC1 Q96Q07 ENST00000314100.10 [Q96Q07-3] ENST00000328403.10 ENST00000498633.1 C9J8E4 ENST00000497373.1 ENST00000481247.6 [Q96Q07-1] |