Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 7562.42 | 459 / 459 | 100% | 92.28 | 1118 / 1118 |
esophagus | 100% | 6769.15 | 1445 / 1445 | 100% | 67.92 | 183 / 183 |
lung | 100% | 7068.75 | 578 / 578 | 100% | 67.08 | 1155 / 1155 |
ovary | 100% | 5649.11 | 180 / 180 | 100% | 45.21 | 430 / 430 |
stomach | 100% | 5174.64 | 359 / 359 | 100% | 64.43 | 286 / 286 |
uterus | 100% | 7134.93 | 170 / 170 | 100% | 66.57 | 459 / 459 |
intestine | 100% | 6417.50 | 966 / 966 | 100% | 68.23 | 526 / 527 |
prostate | 100% | 6098.09 | 245 / 245 | 100% | 75.69 | 501 / 502 |
liver | 100% | 4903.87 | 226 / 226 | 100% | 43.47 | 405 / 406 |
brain | 100% | 6703.57 | 2630 / 2642 | 100% | 71.79 | 705 / 705 |
pancreas | 100% | 3897.30 | 328 / 328 | 99% | 59.14 | 177 / 178 |
bladder | 100% | 7080.19 | 21 / 21 | 99% | 59.66 | 500 / 504 |
thymus | 100% | 5766.66 | 652 / 653 | 99% | 61.31 | 600 / 605 |
kidney | 100% | 5734.17 | 89 / 89 | 99% | 52.10 | 890 / 901 |
skin | 100% | 8929.27 | 1809 / 1809 | 98% | 72.49 | 464 / 472 |
adrenal gland | 100% | 8575.74 | 258 / 258 | 98% | 63.47 | 226 / 230 |
adipose | 100% | 8137.91 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 7894.33 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 65.70 | 29 / 29 |
muscle | 100% | 11540.90 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 5314.02 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 77.38 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 22.50 | 1 / 1 |
heart | 96% | 4945.19 | 830 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 96% | 74.40 | 77 / 80 |
peripheral blood | 96% | 4793.66 | 894 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0034976 | Biological process | response to endoplasmic reticulum stress |
GO_0000045 | Biological process | autophagosome assembly |
GO_0006511 | Biological process | ubiquitin-dependent protein catabolic process |
GO_0016236 | Biological process | macroautophagy |
GO_0035973 | Biological process | aggrephagy |
GO_0031396 | Biological process | regulation of protein ubiquitination |
GO_1901340 | Biological process | negative regulation of store-operated calcium channel activity |
GO_1902175 | Biological process | regulation of oxidative stress-induced intrinsic apoptotic signaling pathway |
GO_0034140 | Biological process | negative regulation of toll-like receptor 3 signaling pathway |
GO_0031398 | Biological process | positive regulation of protein ubiquitination |
GO_1904294 | Biological process | positive regulation of ERAD pathway |
GO_0016241 | Biological process | regulation of macroautophagy |
GO_0097352 | Biological process | autophagosome maturation |
GO_0036503 | Biological process | ERAD pathway |
GO_0071456 | Biological process | cellular response to hypoxia |
GO_0000502 | Cellular component | proteasome complex |
GO_0005886 | Cellular component | plasma membrane |
GO_0031410 | Cellular component | cytoplasmic vesicle |
GO_0048471 | Cellular component | perinuclear region of cytoplasm |
GO_0032991 | Cellular component | protein-containing complex |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0005829 | Cellular component | cytosol |
GO_0005776 | Cellular component | autophagosome |
GO_0005737 | Cellular component | cytoplasm |
GO_0016235 | Cellular component | aggresome |
GO_0019900 | Molecular function | kinase binding |
GO_0042802 | Molecular function | identical protein binding |
GO_0031593 | Molecular function | polyubiquitin modification-dependent protein binding |
GO_0005515 | Molecular function | protein binding |
Gene name | UBQLN1 |
Protein name | Ubiquilin 1 Ubiquilin-1 (Protein linking IAP with cytoskeleton 1) (PLIC-1) (hPLIC-1) |
Synonyms | DA41 PLIC1 |
Description | FUNCTION: Plays an important role in the regulation of different protein degradation mechanisms and pathways including ubiquitin-proteasome system (UPS), autophagy and endoplasmic reticulum-associated protein degradation (ERAD) pathway. Mediates the proteasomal targeting of misfolded or accumulated proteins for degradation by binding (via UBA domain) to their polyubiquitin chains and by interacting (via ubiquitin-like domain) with the subunits of the proteasome . Plays a role in the ERAD pathway via its interaction with ER-localized proteins UBXN4, VCP and HERPUD1 and may form a link between the polyubiquitinated ERAD substrates and the proteasome . Involved in the regulation of macroautophagy and autophagosome formation; required for maturation of autophagy-related protein LC3 from the cytosolic form LC3-I to the membrane-bound form LC3-II and may assist in the maturation of autophagosomes to autolysosomes by mediating autophagosome-lysosome fusion . Negatively regulates the TICAM1/TRIF-dependent toll-like receptor signaling pathway by decreasing the abundance of TICAM1 via the autophagic pathway . Promotes the ubiquitination and lysosomal degradation of ORAI1, consequently down-regulating the ORAI1-mediated Ca2+ mobilization . Suppresses the maturation and proteasomal degradation of amyloid beta A4 protein (A4) by stimulating the lysine 63 (K63)-linked polyubiquitination. Delays the maturation of A4 by sequestering it in the Golgi apparatus and preventing its transport to the cell surface for subsequent processing (By similarity). Ubiquitinates BCL2L10 and thereby stabilizes protein abundance . .; FUNCTION: [Isoform 1]: Plays a role in unfolded protein response (UPR) by attenuating the induction of UPR-inducible genes, DDTI3/CHOP, HSPA5 and PDIA2 during ER stress . Plays a key role in the regulation of the levels of PSEN1 by targeting its accumulation to aggresomes which may then be removed from cells by autophagocytosis . .; FUNCTION: [Isoform 2]: Plays a role in unfolded protein response (UPR) by attenuating the induction of UPR-inducible genes, DDTI3/CHOP, HSPA5 and PDIA2 during ER stress. .; FUNCTION: [Isoform 3]: Plays a role in unfolded protein response (UPR) by attenuating the induction of UPR-inducible genes, DDTI3/CHOP, HSPA5 and PDIA2 during ER stress . Plays a key role in the regulation of the levels of PSEN1 by targeting its accumulation to aggresomes which may then be removed from cells by autophagocytosis . . |
Accessions | H0YDS0 ENST00000529923.1 ENST00000257468.11 [Q9UMX0-2] ENST00000526134.1 Q9UMX0 H0YEZ9 ENST00000376395.9 [Q9UMX0-1] |