Name | Number of supported studies | Average coverage | |
---|---|---|---|
fibroblast | 24 studies | 33% ± 16% | |
B cell | 23 studies | 32% ± 13% | |
endothelial cell | 21 studies | 28% ± 11% | |
pericyte | 21 studies | 30% ± 16% | |
epithelial cell | 20 studies | 43% ± 23% | |
ciliated cell | 18 studies | 62% ± 17% | |
naive B cell | 18 studies | 27% ± 9% | |
memory B cell | 17 studies | 29% ± 9% | |
macrophage | 16 studies | 20% ± 5% | |
astrocyte | 16 studies | 34% ± 15% | |
smooth muscle cell | 16 studies | 30% ± 15% | |
plasmacytoid dendritic cell | 15 studies | 34% ± 12% | |
myofibroblast cell | 13 studies | 37% ± 18% | |
basal cell | 12 studies | 35% ± 18% | |
secretory cell | 12 studies | 45% ± 12% | |
mesothelial cell | 12 studies | 48% ± 22% | |
type I pneumocyte | 11 studies | 40% ± 12% | |
type II pneumocyte | 11 studies | 49% ± 16% | |
endothelial cell of lymphatic vessel | 10 studies | 24% ± 12% | |
club cell | 10 studies | 38% ± 18% | |
goblet cell | 10 studies | 41% ± 18% | |
oligodendrocyte precursor cell | 10 studies | 49% ± 18% | |
connective tissue cell | 9 studies | 46% ± 18% | |
enterocyte | 8 studies | 38% ± 14% | |
respiratory goblet cell | 7 studies | 53% ± 18% | |
abnormal cell | 7 studies | 30% ± 17% | |
neuron | 7 studies | 47% ± 20% | |
glutamatergic neuron | 7 studies | 44% ± 23% | |
progenitor cell | 6 studies | 41% ± 15% | |
retinal rod cell | 6 studies | 35% ± 16% | |
microglial cell | 6 studies | 22% ± 5% | |
retinal cone cell | 6 studies | 55% ± 25% | |
adipocyte | 6 studies | 32% ± 17% | |
oligodendrocyte | 6 studies | 27% ± 6% | |
GABAergic neuron | 6 studies | 42% ± 20% | |
conventional dendritic cell | 5 studies | 28% ± 12% | |
endothelial cell of artery | 5 studies | 29% ± 17% | |
plasma cell | 5 studies | 29% ± 10% | |
mucus secreting cell | 5 studies | 36% ± 15% | |
endothelial cell of vascular tree | 5 studies | 19% ± 5% | |
interneuron | 5 studies | 41% ± 19% | |
deuterosomal cell | 4 studies | 39% ± 15% | |
duct epithelial cell | 4 studies | 34% ± 20% | |
ionocyte | 4 studies | 36% ± 4% | |
pancreatic A cell | 4 studies | 68% ± 20% | |
type B pancreatic cell | 4 studies | 59% ± 25% | |
kidney distal convoluted tubule epithelial cell | 4 studies | 36% ± 6% | |
epithelial cell of proximal tubule | 4 studies | 25% ± 8% | |
enteroendocrine cell | 4 studies | 46% ± 15% | |
OFF-bipolar cell | 4 studies | 34% ± 6% | |
ON-bipolar cell | 4 studies | 30% ± 8% | |
retinal ganglion cell | 4 studies | 51% ± 26% | |
precursor B cell | 4 studies | 30% ± 11% | |
myeloid cell | 4 studies | 24% ± 7% | |
immature B cell | 4 studies | 35% ± 17% | |
amacrine cell | 4 studies | 42% ± 18% | |
retina horizontal cell | 4 studies | 41% ± 12% | |
alveolar macrophage | 4 studies | 22% ± 4% | |
Mueller cell | 4 studies | 54% ± 16% | |
muscle cell | 4 studies | 24% ± 8% | |
hematopoietic stem cell | 4 studies | 26% ± 4% | |
hematopoietic precursor cell | 3 studies | 28% ± 9% | |
squamous epithelial cell | 3 studies | 55% ± 17% | |
pancreatic D cell | 3 studies | 61% ± 27% | |
T cell | 3 studies | 24% ± 9% | |
renal alpha-intercalated cell | 3 studies | 30% ± 9% | |
intestinal crypt stem cell | 3 studies | 36% ± 7% | |
neural crest cell | 3 studies | 40% ± 6% | |
transit amplifying cell | 3 studies | 27% ± 2% | |
retinal bipolar neuron | 3 studies | 55% ± 14% | |
pro-B cell | 3 studies | 25% ± 2% | |
retinal pigment epithelial cell | 3 studies | 34% ± 25% | |
serous secreting cell | 3 studies | 30% ± 4% | |
rod bipolar cell | 3 studies | 55% ± 11% | |
acinar cell | 3 studies | 50% ± 32% | |
kidney loop of Henle epithelial cell | 3 studies | 29% ± 12% | |
dendritic cell | 3 studies | 31% ± 10% | |
pancreatic ductal cell | 3 studies | 75% ± 20% | |
glial cell | 3 studies | 41% ± 24% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 15276.48 | 2642 / 2642 | 100% | 293.08 | 705 / 705 |
ovary | 100% | 9541.96 | 180 / 180 | 100% | 127.58 | 429 / 430 |
thymus | 100% | 13266.15 | 653 / 653 | 100% | 152.84 | 603 / 605 |
intestine | 100% | 13558.30 | 966 / 966 | 100% | 150.34 | 525 / 527 |
lung | 100% | 15761.57 | 577 / 578 | 100% | 121.92 | 1151 / 1155 |
stomach | 100% | 7826.13 | 359 / 359 | 99% | 135.38 | 284 / 286 |
kidney | 100% | 8918.65 | 89 / 89 | 99% | 76.12 | 891 / 901 |
pancreas | 100% | 5596.39 | 328 / 328 | 99% | 167.45 | 176 / 178 |
prostate | 100% | 6506.22 | 244 / 245 | 99% | 58.82 | 496 / 502 |
adrenal gland | 100% | 8838.62 | 258 / 258 | 98% | 123.59 | 225 / 230 |
skin | 99% | 6468.34 | 1784 / 1809 | 99% | 118.87 | 467 / 472 |
esophagus | 100% | 5915.51 | 1441 / 1445 | 97% | 103.99 | 178 / 183 |
uterus | 100% | 8826.83 | 170 / 170 | 97% | 85.18 | 444 / 459 |
bladder | 100% | 5961.14 | 21 / 21 | 96% | 81.37 | 482 / 504 |
breast | 100% | 11397.09 | 459 / 459 | 94% | 65.75 | 1049 / 1118 |
liver | 74% | 2367.38 | 168 / 226 | 46% | 22.03 | 186 / 406 |
adipose | 100% | 15084.56 | 1204 / 1204 | 0% | 0 | 0 / 0 |
muscle | 100% | 12533.93 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 6964.80 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 34.39 | 1 / 1 |
blood vessel | 100% | 7708.11 | 1330 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 94.56 | 79 / 80 |
heart | 94% | 5270.82 | 809 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 90% | 35.05 | 26 / 29 |
tonsil | 0% | 0 | 0 / 0 | 89% | 48.43 | 40 / 45 |
peripheral blood | 29% | 1004.28 | 274 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0008150 | Biological process | biological_process |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005886 | Cellular component | plasma membrane |
GO_0003674 | Molecular function | molecular_function |
Gene name | TSPAN3 |
Protein name | Tetraspanin 3 Tetraspanin-3 (Tspan-3) (Tetraspanin TM4-A) (Transmembrane 4 superfamily member 8) Alternative protein TSPAN3 |
Synonyms | TM4SF8 |
Description | FUNCTION: Regulates the proliferation and migration of oligodendrocytes, a process essential for normal myelination and repair. . |
Accessions | ENST00000267970.9 [O60637-1] ENST00000558745.5 O60637 ENST00000561277.5 H0YKJ9 H0YMH8 ENST00000346495.6 [O60637-2] ENST00000424443.7 [O60637-3] ENST00000559494.1 L8E893 |