TRIM44 | OmnibusX

I. Expression across cell types

Name	Number of supported studies	Average coverage
endothelial cell	29 studies	29% ± 13%	Explore
fibroblast	23 studies	26% ± 17%	Explore
pericyte	21 studies	27% ± 19%	Explore
B cell	20 studies	26% ± 18%	Explore
macrophage	18 studies	30% ± 21%	Explore
smooth muscle cell	16 studies	25% ± 20%	Explore
astrocyte	16 studies	36% ± 16%	Explore
naive B cell	14 studies	21% ± 5%	Explore
endothelial cell of lymphatic vessel	13 studies	29% ± 22%	Explore
oligodendrocyte	13 studies	39% ± 13%	Explore
ciliated cell	12 studies	29% ± 11%	Explore
oligodendrocyte precursor cell	12 studies	38% ± 17%	Explore
microglial cell	12 studies	35% ± 13%	Explore
glutamatergic neuron	11 studies	51% ± 24%	Explore
plasmacytoid dendritic cell	11 studies	29% ± 10%	Explore
mast cell	10 studies	28% ± 23%	Explore
GABAergic neuron	10 studies	48% ± 22%	Explore
vein endothelial cell	10 studies	23% ± 10%	Explore
classical monocyte	9 studies	26% ± 11%	Explore
non-classical monocyte	9 studies	25% ± 11%	Explore
myofibroblast cell	9 studies	21% ± 8%	Explore
epithelial cell	9 studies	34% ± 17%	Explore
basal cell	9 studies	37% ± 25%	Explore
natural killer cell	8 studies	31% ± 26%	Explore
neuron	8 studies	39% ± 17%	Explore
endothelial cell of artery	8 studies	18% ± 2%	Explore
amacrine cell	8 studies	40% ± 11%	Explore
retinal rod cell	8 studies	25% ± 6%	Explore
monocyte	8 studies	34% ± 25%	Explore
adipocyte	8 studies	26% ± 6%	Explore
dendritic cell	8 studies	39% ± 25%	Explore
capillary endothelial cell	7 studies	19% ± 4%	Explore
retinal cone cell	7 studies	37% ± 15%	Explore
type I pneumocyte	6 studies	23% ± 6%	Explore
respiratory goblet cell	6 studies	27% ± 10%	Explore
memory B cell	6 studies	20% ± 3%	Explore
interneuron	6 studies	55% ± 23%	Explore
retinal ganglion cell	6 studies	45% ± 22%	Explore
myeloid cell	6 studies	27% ± 7%	Explore
club cell	6 studies	24% ± 7%	Explore
retina horizontal cell	6 studies	28% ± 7%	Explore
Mueller cell	6 studies	29% ± 9%	Explore
endothelial cell of vascular tree	6 studies	36% ± 30%	Explore
T cell	5 studies	17% ± 1%	Explore
CD16-negative, CD56-bright natural killer cell, human	5 studies	19% ± 5%	Explore
conventional dendritic cell	5 studies	44% ± 32%	Explore
connective tissue cell	5 studies	22% ± 9%	Explore
abnormal cell	5 studies	24% ± 9%	Explore
retinal bipolar neuron	5 studies	39% ± 7%	Explore
lymphocyte	5 studies	24% ± 5%	Explore
type II pneumocyte	5 studies	25% ± 7%	Explore
secretory cell	4 studies	24% ± 6%	Explore
CD16-positive, CD56-dim natural killer cell, human	4 studies	21% ± 2%	Explore
CD4-positive, alpha-beta T cell	4 studies	22% ± 3%	Explore
CD8-positive, alpha-beta T cell	4 studies	35% ± 28%	Explore
granule cell	4 studies	44% ± 11%	Explore
precursor B cell	4 studies	22% ± 4%	Explore
plasma cell	4 studies	42% ± 32%	Explore
cardiac muscle cell	4 studies	21% ± 2%	Explore
OFF-bipolar cell	4 studies	35% ± 3%	Explore
ON-bipolar cell	4 studies	34% ± 3%	Explore
muscle cell	4 studies	27% ± 11%	Explore
brush cell	4 studies	21% ± 5%	Explore
alveolar macrophage	4 studies	29% ± 12%	Explore
ionocyte	3 studies	24% ± 5%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	3 studies	20% ± 6%	Explore
kidney distal convoluted tubule epithelial cell	3 studies	18% ± 1%	Explore
epithelial cell of proximal tubule	3 studies	19% ± 3%	Explore
GABAergic interneuron	3 studies	39% ± 3%	Explore
glial cell	3 studies	26% ± 7%	Explore
immature B cell	3 studies	24% ± 8%	Explore
pro-B cell	3 studies	29% ± 4%	Explore
GABAergic amacrine cell	3 studies	34% ± 3%	Explore
glycinergic amacrine cell	3 studies	36% ± 1%	Explore
rod bipolar cell	3 studies	41% ± 2%	Explore
CD8-positive, alpha-beta memory T cell	3 studies	44% ± 37%	Explore
innate lymphoid cell	3 studies	48% ± 37%	Explore
gamma-delta T cell	3 studies	27% ± 12%	Explore
hepatocyte	3 studies	48% ± 25%	Explore
ependymal cell	3 studies	37% ± 17%	Explore
leukocyte	3 studies	24% ± 6%	Explore
group 3 innate lymphoid cell	3 studies	26% ± 9%	Explore
goblet cell	3 studies	34% ± 19%	Explore
transit amplifying cell	3 studies	35% ± 22%	Explore

II. Expression across tissues

Name	Number of supported studies	Average coverage
brain	16 studies	42% ± 21%	Explore
lung	10 studies	22% ± 7%	Explore
eye	9 studies	32% ± 8%	Explore
peripheral blood	5 studies	27% ± 11%	Explore
intestine	4 studies	21% ± 4%	Explore
adipose	4 studies	24% ± 4%	Explore
heart	3 studies	20% ± 3%	Explore
liver	3 studies	27% ± 12%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	6512.59	1445 / 1445	100%	33.54	183 / 183
ovary	100%	6243.31	180 / 180	100%	39.11	430 / 430
stomach	100%	5639.41	359 / 359	100%	30.69	286 / 286
brain	100%	9534.27	2641 / 2642	100%	28.15	705 / 705
breast	100%	7399.03	459 / 459	100%	39.05	1117 / 1118
prostate	100%	6253.36	245 / 245	100%	28.90	501 / 502
lung	100%	7394.10	578 / 578	100%	26.91	1152 / 1155
pancreas	100%	5266.96	327 / 328	100%	23.85	178 / 178
intestine	100%	7801.59	966 / 966	100%	27.23	525 / 527
thymus	100%	6778.57	653 / 653	100%	25.61	602 / 605
uterus	100%	7160.48	170 / 170	99%	22.55	456 / 459
kidney	100%	7290.55	89 / 89	99%	31.55	895 / 901
bladder	100%	7391.81	21 / 21	98%	21.14	496 / 504
skin	100%	6753.92	1809 / 1809	98%	33.13	463 / 472
adrenal gland	100%	5970.14	258 / 258	96%	21.06	221 / 230
liver	100%	3696.39	226 / 226	96%	14.07	390 / 406
adipose	100%	7528.48	1204 / 1204	0%	0	0 / 0
blood vessel	100%	6603.65	1335 / 1335	0%	0	0 / 0
spleen	100%	6456.33	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	20.42	45 / 45
muscle	100%	4438.15	802 / 803	0%	0	0 / 0
heart	97%	4080.59	837 / 861	0%	0	0 / 0
lymph node	0%	0	0 / 0	97%	21.28	28 / 29
eye	0%	0	0 / 0	95%	17.64	76 / 80
peripheral blood	69%	3497.34	643 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1

III. Associated gene sets

GO_0001961	Biological process	positive regulation of cytokine-mediated signaling pathway
GO_0016567	Biological process	protein ubiquitination
GO_0010468	Biological process	regulation of gene expression
GO_1901224	Biological process	positive regulation of non-canonical NF-kappaB signal transduction
GO_0045893	Biological process	positive regulation of DNA-templated transcription
GO_0061944	Biological process	negative regulation of protein K48-linked ubiquitination
GO_0050821	Biological process	protein stabilization
GO_0002230	Biological process	positive regulation of defense response to virus by host
GO_1990776	Biological process	response to angiotensin
GO_0005737	Cellular component	cytoplasm
GO_0061630	Molecular function	ubiquitin protein ligase activity
GO_0005515	Molecular function	protein binding
GO_0008270	Molecular function	zinc ion binding

Gene name	TRIM44
Protein name	Tripartite motif-containing protein 44 (Protein DIPB)
Synonyms	DIPB
Description	FUNCTION: May play a role in the process of differentiation and maturation of neuronal cells (By similarity). May regulate the activity of TRIM17. Is a negative regulator of PAX6 expression . .
Accessions	ENST00000299413.7 Q96DX7

TRIM44 report

I. Expression across cell types

II. Expression across tissues

III. Associated gene sets

IV. Literature review