Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 12 studies | 24% ± 8% | |
lung | 9 studies | 29% ± 13% | |
kidney | 7 studies | 18% ± 2% | |
brain | 5 studies | 31% ± 4% | |
intestine | 5 studies | 24% ± 12% | |
pancreas | 4 studies | 42% ± 18% | |
liver | 4 studies | 31% ± 19% | |
placenta | 3 studies | 28% ± 1% | |
bone marrow | 3 studies | 22% ± 6% | |
eye | 3 studies | 24% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
adrenal gland | 100% | 7003.98 | 258 / 258 | 100% | 81.22 | 230 / 230 |
brain | 100% | 5147.54 | 2642 / 2642 | 100% | 102.33 | 705 / 705 |
esophagus | 100% | 3548.61 | 1445 / 1445 | 100% | 58.73 | 183 / 183 |
lung | 100% | 5788.09 | 578 / 578 | 100% | 70.89 | 1155 / 1155 |
ovary | 100% | 2833.00 | 180 / 180 | 100% | 40.47 | 430 / 430 |
prostate | 100% | 3997.30 | 245 / 245 | 100% | 62.17 | 502 / 502 |
breast | 100% | 4562.26 | 459 / 459 | 100% | 83.11 | 1117 / 1118 |
uterus | 100% | 3469.71 | 170 / 170 | 100% | 59.45 | 458 / 459 |
kidney | 100% | 4280.91 | 89 / 89 | 100% | 68.09 | 899 / 901 |
liver | 100% | 3208.26 | 226 / 226 | 99% | 40.87 | 403 / 406 |
bladder | 100% | 3826.57 | 21 / 21 | 99% | 52.67 | 500 / 504 |
thymus | 100% | 3948.60 | 653 / 653 | 99% | 51.42 | 600 / 605 |
pancreas | 100% | 3013.80 | 328 / 328 | 99% | 59.04 | 176 / 178 |
intestine | 100% | 3724.89 | 966 / 966 | 98% | 52.24 | 518 / 527 |
stomach | 100% | 3087.64 | 359 / 359 | 98% | 50.69 | 281 / 286 |
skin | 100% | 4783.31 | 1808 / 1809 | 96% | 65.72 | 452 / 472 |
lymph node | 0% | 0 | 0 / 0 | 100% | 44.35 | 29 / 29 |
spleen | 100% | 4114.80 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 55.43 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 14.69 | 1 / 1 |
adipose | 100% | 5042.08 | 1203 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 4599.51 | 1332 / 1335 | 0% | 0 | 0 / 0 |
muscle | 99% | 2311.56 | 797 / 803 | 0% | 0 | 0 / 0 |
heart | 99% | 3438.26 | 852 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 92% | 3589.46 | 851 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 80% | 27.07 | 64 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0046907 | Biological process | intracellular transport |
GO_0009306 | Biological process | protein secretion |
GO_0045054 | Biological process | constitutive secretory pathway |
GO_0000139 | Cellular component | Golgi membrane |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0005515 | Molecular function | protein binding |
Gene name | TMEM167A |
Protein name | Protein kish-A (Transmembrane protein 167) (Transmembrane protein 167A) |
Synonyms | TMEM167 |
Description | FUNCTION: Involved in the early part of the secretory pathway. . |
Accessions | ENST00000502346.2 Q8TBQ9 |