Name | Number of supported studies | Average coverage | |
---|---|---|---|
fibroblast | 27 studies | 24% ± 9% | |
endothelial cell | 22 studies | 23% ± 8% | |
pericyte | 12 studies | 19% ± 5% | |
smooth muscle cell | 10 studies | 19% ± 3% | |
epithelial cell | 8 studies | 37% ± 17% | |
ciliated cell | 8 studies | 33% ± 9% | |
astrocyte | 8 studies | 32% ± 12% | |
connective tissue cell | 7 studies | 22% ± 6% | |
endothelial cell of vascular tree | 7 studies | 18% ± 4% | |
basal cell | 7 studies | 33% ± 13% | |
adipocyte | 7 studies | 27% ± 9% | |
endothelial cell of lymphatic vessel | 7 studies | 22% ± 4% | |
plasmacytoid dendritic cell | 7 studies | 24% ± 7% | |
macrophage | 6 studies | 23% ± 3% | |
type I pneumocyte | 6 studies | 20% ± 4% | |
oligodendrocyte | 6 studies | 27% ± 6% | |
natural killer cell | 6 studies | 18% ± 3% | |
goblet cell | 6 studies | 24% ± 11% | |
B cell | 5 studies | 23% ± 4% | |
capillary endothelial cell | 5 studies | 17% ± 2% | |
classical monocyte | 4 studies | 23% ± 7% | |
endothelial cell of artery | 4 studies | 17% ± 2% | |
club cell | 4 studies | 23% ± 3% | |
retina horizontal cell | 4 studies | 29% ± 13% | |
lymphocyte | 4 studies | 21% ± 4% | |
myofibroblast cell | 4 studies | 18% ± 2% | |
GABAergic neuron | 4 studies | 40% ± 14% | |
glutamatergic neuron | 4 studies | 48% ± 16% | |
microglial cell | 4 studies | 24% ± 5% | |
oligodendrocyte precursor cell | 4 studies | 31% ± 8% | |
neuron | 4 studies | 31% ± 12% | |
pancreatic A cell | 3 studies | 27% ± 3% | |
CD16-negative, CD56-bright natural killer cell, human | 3 studies | 18% ± 2% | |
CD4-positive, alpha-beta T cell | 3 studies | 19% ± 1% | |
hematopoietic precursor cell | 3 studies | 23% ± 9% | |
non-classical monocyte | 3 studies | 26% ± 6% | |
glomerular endothelial cell | 3 studies | 20% ± 3% | |
myeloid cell | 3 studies | 26% ± 3% | |
plasma cell | 3 studies | 26% ± 7% | |
amacrine cell | 3 studies | 30% ± 10% | |
dendritic cell | 3 studies | 30% ± 13% | |
rod bipolar cell | 3 studies | 21% ± 3% | |
intestinal crypt stem cell | 3 studies | 19% ± 1% | |
T cell | 3 studies | 17% ± 1% | |
monocyte | 3 studies | 18% ± 1% | |
transit amplifying cell | 3 studies | 26% ± 14% | |
mesothelial cell | 3 studies | 31% ± 13% | |
interneuron | 3 studies | 43% ± 20% | |
mast cell | 3 studies | 21% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1301.38 | 1445 / 1445 | 100% | 13.44 | 183 / 183 |
lung | 100% | 1519.46 | 578 / 578 | 100% | 16.82 | 1155 / 1155 |
ovary | 100% | 1765.21 | 180 / 180 | 100% | 17.87 | 430 / 430 |
brain | 100% | 1204.99 | 2638 / 2642 | 100% | 16.60 | 705 / 705 |
uterus | 100% | 1657.84 | 170 / 170 | 100% | 16.22 | 457 / 459 |
breast | 100% | 1478.91 | 459 / 459 | 100% | 16.92 | 1113 / 1118 |
prostate | 100% | 1369.35 | 245 / 245 | 99% | 16.07 | 499 / 502 |
bladder | 100% | 1440.52 | 21 / 21 | 99% | 14.54 | 500 / 504 |
intestine | 100% | 1394.00 | 966 / 966 | 99% | 12.22 | 522 / 527 |
thymus | 100% | 1584.39 | 653 / 653 | 99% | 18.50 | 599 / 605 |
stomach | 100% | 1212.01 | 359 / 359 | 99% | 12.24 | 283 / 286 |
skin | 100% | 1347.46 | 1809 / 1809 | 99% | 15.46 | 466 / 472 |
kidney | 100% | 1157.75 | 89 / 89 | 98% | 14.06 | 884 / 901 |
pancreas | 100% | 707.77 | 327 / 328 | 98% | 14.24 | 175 / 178 |
liver | 100% | 622.95 | 226 / 226 | 95% | 8.25 | 384 / 406 |
adrenal gland | 100% | 1615.61 | 258 / 258 | 94% | 15.02 | 217 / 230 |
adipose | 100% | 1389.56 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2012.23 | 1335 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 1392.25 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 11.82 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 5.47 | 1 / 1 |
muscle | 100% | 884.10 | 800 / 803 | 0% | 0 | 0 / 0 |
heart | 99% | 1098.53 | 852 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 97% | 8.07 | 28 / 29 |
eye | 0% | 0 | 0 / 0 | 88% | 7.85 | 70 / 80 |
peripheral blood | 78% | 600.50 | 720 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0097190 | Biological process | apoptotic signaling pathway |
GO_0007186 | Biological process | G protein-coupled receptor signaling pathway |
GO_0005886 | Cellular component | plasma membrane |
GO_0001540 | Molecular function | amyloid-beta binding |
GO_0004930 | Molecular function | G protein-coupled receptor activity |
GO_0005515 | Molecular function | protein binding |
Gene name | TM2D1 |
Protein name | TM2 domain-containing protein 1 (Amyloid-beta-binding protein) (hBBP) TM2 domain containing 1 |
Synonyms | hCG_1780983 BBP |
Description | FUNCTION: May participate in amyloid-beta-induced apoptosis via its interaction with beta-APP42. . |
Accessions | U3KPW4 ENST00000494926.5 J3KPA2 Q9BX74 ENST00000371180.6 ENST00000371177.2 ENST00000496465.1 U3KPS6 ENST00000606498.5 U3KQ44 ENST00000468586.5 U3KQF9 ENST00000488206.5 U3KQS3 ENST00000371180.7 |