TIMM17B | OmnibusX

I. Expression across cell types

Name	Number of supported studies	Average coverage
classical monocyte	13 studies	24% ± 7%	Explore
CD8-positive, alpha-beta T cell	12 studies	21% ± 3%	Explore
conventional dendritic cell	11 studies	25% ± 13%	Explore
natural killer cell	11 studies	22% ± 6%	Explore
B cell	11 studies	20% ± 5%	Explore
plasma cell	9 studies	31% ± 10%	Explore
non-classical monocyte	8 studies	26% ± 8%	Explore
epithelial cell	8 studies	35% ± 17%	Explore
naive B cell	8 studies	17% ± 2%	Explore
regulatory T cell	8 studies	18% ± 2%	Explore
smooth muscle cell	7 studies	20% ± 4%	Explore
ciliated cell	7 studies	34% ± 15%	Explore
memory B cell	7 studies	19% ± 3%	Explore
CD4-positive, alpha-beta T cell	7 studies	21% ± 5%	Explore
plasmacytoid dendritic cell	7 studies	27% ± 8%	Explore
CD8-positive, alpha-beta memory T cell	6 studies	21% ± 7%	Explore
T cell	6 studies	18% ± 2%	Explore
basal cell	6 studies	31% ± 19%	Explore
macrophage	6 studies	22% ± 6%	Explore
fibroblast	6 studies	21% ± 4%	Explore
pericyte	6 studies	20% ± 4%	Explore
abnormal cell	6 studies	24% ± 3%	Explore
plasmablast	5 studies	45% ± 25%	Explore
CD4-positive, alpha-beta memory T cell	5 studies	19% ± 4%	Explore
monocyte	5 studies	18% ± 3%	Explore
mature NK T cell	5 studies	17% ± 2%	Explore
myofibroblast cell	5 studies	18% ± 1%	Explore
CD16-positive, CD56-dim natural killer cell, human	5 studies	21% ± 5%	Explore
CD16-negative, CD56-bright natural killer cell, human	5 studies	22% ± 5%	Explore
dendritic cell	5 studies	34% ± 16%	Explore
hematopoietic precursor cell	4 studies	23% ± 3%	Explore
kidney loop of Henle epithelial cell	4 studies	18% ± 2%	Explore
connective tissue cell	4 studies	26% ± 6%	Explore
neuron	4 studies	44% ± 14%	Explore
precursor B cell	4 studies	26% ± 9%	Explore
effector CD4-positive, alpha-beta T cell	4 studies	20% ± 1%	Explore
effector CD8-positive, alpha-beta T cell	4 studies	23% ± 4%	Explore
enteroendocrine cell	4 studies	28% ± 17%	Explore
gamma-delta T cell	4 studies	29% ± 18%	Explore
mucosal invariant T cell	4 studies	18% ± 2%	Explore
secretory cell	3 studies	32% ± 22%	Explore
pancreatic A cell	3 studies	39% ± 8%	Explore
kidney distal convoluted tubule epithelial cell	3 studies	24% ± 2%	Explore
pro-B cell	3 studies	25% ± 3%	Explore
type I pneumocyte	3 studies	28% ± 2%	Explore
type II pneumocyte	3 studies	27% ± 11%	Explore
retina horizontal cell	3 studies	27% ± 15%	Explore
endothelial cell	3 studies	24% ± 10%	Explore
erythroblast	3 studies	30% ± 15%	Explore
exhausted T cell	3 studies	22% ± 3%	Explore
intermediate monocyte	3 studies	27% ± 9%	Explore
goblet cell	3 studies	26% ± 9%	Explore
effector memory CD8-positive, alpha-beta T cell	3 studies	20% ± 3%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	3 studies	19% ± 2%	Explore

II. Expression across tissues

Name	Number of supported studies	Average coverage
peripheral blood	9 studies	21% ± 3%	Explore
lung	7 studies	27% ± 15%	Explore
kidney	4 studies	18% ± 1%	Explore
pancreas	3 studies	33% ± 9%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
adrenal gland	100%	1753.54	258 / 258	100%	61.05	230 / 230
esophagus	100%	1541.71	1445 / 1445	100%	39.17	183 / 183
liver	100%	1135.47	226 / 226	100%	43.35	406 / 406
ovary	100%	1255.30	180 / 180	100%	95.87	430 / 430
uterus	100%	1338.56	170 / 170	100%	69.11	459 / 459
brain	100%	1378.95	2640 / 2642	100%	43.71	705 / 705
thymus	100%	1608.37	653 / 653	100%	38.07	603 / 605
intestine	100%	1645.82	966 / 966	100%	70.93	525 / 527
skin	100%	1471.91	1809 / 1809	100%	42.06	470 / 472
pancreas	100%	839.14	328 / 328	99%	48.09	177 / 178
prostate	100%	1755.68	245 / 245	99%	62.99	499 / 502
stomach	100%	1372.89	359 / 359	99%	64.40	284 / 286
kidney	100%	1808.83	89 / 89	99%	35.70	894 / 901
bladder	100%	1582.57	21 / 21	99%	69.77	500 / 504
breast	100%	1310.03	459 / 459	99%	50.89	1109 / 1118
lung	100%	1407.43	577 / 578	99%	53.20	1144 / 1155
adipose	100%	1114.63	1204 / 1204	0%	0	0 / 0
lymph node	0%	0	0 / 0	100%	92.39	29 / 29
muscle	100%	2242.83	803 / 803	0%	0	0 / 0
peripheral blood	100%	2035.62	929 / 929	0%	0	0 / 0
spleen	100%	1872.90	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	58.22	45 / 45
ureter	0%	0	0 / 0	100%	42.61	1 / 1
blood vessel	100%	1528.72	1334 / 1335	0%	0	0 / 0
heart	99%	1722.78	852 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	98%	20.30	78 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

III. Associated gene sets

GO_0030150	Biological process	protein import into mitochondrial matrix
GO_0006886	Biological process	intracellular protein transport
GO_0006626	Biological process	protein targeting to mitochondrion
GO_0005743	Cellular component	mitochondrial inner membrane
GO_0005744	Cellular component	TIM23 mitochondrial import inner membrane translocase complex
GO_0008320	Molecular function	protein transmembrane transporter activity
GO_0005515	Molecular function	protein binding

IV. Literature review

[source]

Gene name	TIMM17B
Protein name	Translocase of inner mitochondrial membrane 17B Mitochondrial import inner membrane translocase subunit Tim17-B TIMM17B protein
Synonyms	JM3 TIM17B
Description	FUNCTION: Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. FUNCTION: Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. . FUNCTION: Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. . FUNCTION: Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. . FUNCTION: Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. .
Accessions	V9GYK7 ENST00000396779.7 [O60830-2] ENST00000710084.1 [O60830-2] ENST00000710085.1 [O60830-1] ENST00000710086.1 [O60830-2] A0A8Q3SIA0 V9GYS0 V9GYU0 ENST00000465150.6 [O60830-2] ENST00000495490.6 ENST00000696123.1 [O60830-1] ENST00000490755.2 ENST00000466995.5 ENST00000696124.1 ENST00000376582.7 [O60830-1] O60830 Q8NCS3 ENST00000710087.1 [O60830-1]

TIMM17B report

I. Expression across cell types

II. Expression across tissues

III. Associated gene sets

IV. Literature review