TCEAL4 | OmnibusX

I. Expression across cell types

Name	Number of supported studies	Average coverage
fibroblast	36 studies	41% ± 17%	Explore
endothelial cell	30 studies	36% ± 14%	Explore
pericyte	29 studies	38% ± 14%	Explore
smooth muscle cell	25 studies	48% ± 19%	Explore
macrophage	19 studies	24% ± 10%	Explore
basal cell	18 studies	29% ± 12%	Explore
connective tissue cell	16 studies	46% ± 18%	Explore
endothelial cell of lymphatic vessel	15 studies	47% ± 13%	Explore
mast cell	14 studies	24% ± 7%	Explore
epithelial cell	13 studies	39% ± 20%	Explore
myofibroblast cell	13 studies	51% ± 13%	Explore
capillary endothelial cell	12 studies	27% ± 10%	Explore
vein endothelial cell	11 studies	28% ± 8%	Explore
endothelial cell of artery	10 studies	30% ± 10%	Explore
endothelial cell of vascular tree	10 studies	31% ± 8%	Explore
secretory cell	9 studies	31% ± 17%	Explore
ciliated cell	9 studies	36% ± 15%	Explore
abnormal cell	8 studies	33% ± 12%	Explore
neuron	8 studies	42% ± 21%	Explore
mesothelial cell	8 studies	47% ± 14%	Explore
epithelial cell of proximal tubule	7 studies	29% ± 13%	Explore
astrocyte	7 studies	29% ± 15%	Explore
type II pneumocyte	6 studies	36% ± 18%	Explore
conventional dendritic cell	6 studies	30% ± 21%	Explore
kidney loop of Henle epithelial cell	6 studies	36% ± 11%	Explore
type I pneumocyte	5 studies	33% ± 10%	Explore
progenitor cell	5 studies	30% ± 14%	Explore
enteroendocrine cell	5 studies	36% ± 21%	Explore
GABAergic neuron	5 studies	30% ± 11%	Explore
glutamatergic neuron	5 studies	37% ± 16%	Explore
oligodendrocyte precursor cell	5 studies	30% ± 9%	Explore
interneuron	5 studies	26% ± 12%	Explore
ionocyte	4 studies	26% ± 9%	Explore
pancreatic A cell	4 studies	50% ± 10%	Explore
type B pancreatic cell	4 studies	51% ± 16%	Explore
kidney distal convoluted tubule epithelial cell	4 studies	47% ± 8%	Explore
retinal ganglion cell	4 studies	65% ± 25%	Explore
myeloid cell	4 studies	27% ± 14%	Explore
club cell	4 studies	32% ± 9%	Explore
amacrine cell	4 studies	47% ± 21%	Explore
adventitial cell	4 studies	37% ± 7%	Explore
oligodendrocyte	4 studies	26% ± 9%	Explore
luminal hormone-sensing cell of mammary gland	4 studies	49% ± 4%	Explore
dendritic cell	4 studies	28% ± 9%	Explore
hematopoietic stem cell	4 studies	31% ± 2%	Explore
pancreatic D cell	3 studies	53% ± 14%	Explore
glomerular endothelial cell	3 studies	27% ± 5%	Explore
renal alpha-intercalated cell	3 studies	39% ± 11%	Explore
neural crest cell	3 studies	37% ± 1%	Explore
retinal bipolar neuron	3 studies	47% ± 21%	Explore
OFF-bipolar cell	3 studies	42% ± 23%	Explore
ON-bipolar cell	3 studies	41% ± 23%	Explore
extravillous trophoblast	3 studies	54% ± 15%	Explore
retina horizontal cell	3 studies	49% ± 16%	Explore
retinal pigment epithelial cell	3 studies	42% ± 25%	Explore
retinal rod cell	3 studies	29% ± 8%	Explore
microglial cell	3 studies	25% ± 8%	Explore
alveolar macrophage	3 studies	20% ± 2%	Explore
Mueller cell	3 studies	44% ± 9%	Explore
myoepithelial cell	3 studies	50% ± 12%	Explore
luminal cell of prostate epithelium	3 studies	24% ± 7%	Explore
muscle cell	3 studies	40% ± 24%	Explore
pancreatic ductal cell	3 studies	48% ± 5%	Explore
megakaryocyte-erythroid progenitor cell	3 studies	37% ± 20%	Explore
glial cell	3 studies	38% ± 22%	Explore
keratinocyte	3 studies	19% ± 3%	Explore

II. Expression across tissues

Name	Number of supported studies	Average coverage
lung	12 studies	30% ± 13%	Explore
brain	9 studies	26% ± 9%	Explore
eye	8 studies	30% ± 12%	Explore
kidney	6 studies	26% ± 7%	Explore
intestine	5 studies	33% ± 15%	Explore
pancreas	4 studies	46% ± 14%	Explore
uterus	4 studies	52% ± 10%	Explore
prostate	4 studies	23% ± 8%	Explore
breast	4 studies	24% ± 3%	Explore
liver	4 studies	20% ± 4%	Explore
placenta	3 studies	41% ± 17%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
adrenal gland	100%	9638.04	258 / 258	100%	214.86	230 / 230
ovary	100%	37971.88	180 / 180	100%	78.32	430 / 430
prostate	100%	15508.22	245 / 245	100%	211.94	502 / 502
kidney	100%	6048.43	89 / 89	100%	109.57	900 / 901
brain	100%	6963.00	2633 / 2642	100%	186.14	705 / 705
breast	100%	7790.79	459 / 459	99%	258.12	1111 / 1118
thymus	100%	6646.02	651 / 653	100%	173.85	603 / 605
skin	100%	7261.38	1806 / 1809	99%	129.40	467 / 472
uterus	100%	30989.01	170 / 170	97%	126.64	447 / 459
bladder	100%	20168.33	21 / 21	95%	104.87	481 / 504
lung	99%	7908.21	575 / 578	96%	77.82	1104 / 1155
esophagus	99%	14581.60	1437 / 1445	85%	47.83	155 / 183
intestine	97%	7144.45	935 / 966	85%	50.95	448 / 527
stomach	96%	6309.91	345 / 359	83%	47.42	236 / 286
pancreas	77%	2263.90	253 / 328	99%	105.08	177 / 178
liver	78%	2316.57	177 / 226	98%	74.69	396 / 406
blood vessel	100%	17874.10	1335 / 1335	0%	0	0 / 0
eye	0%	0	0 / 0	100%	123.77	80 / 80
ureter	0%	0	0 / 0	100%	166.20	1 / 1
adipose	100%	7364.29	1200 / 1204	0%	0	0 / 0
spleen	98%	5694.97	237 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	96%	65.13	43 / 45
heart	92%	4809.79	792 / 861	0%	0	0 / 0
lymph node	0%	0	0 / 0	90%	53.35	26 / 29
muscle	72%	1997.97	579 / 803	0%	0	0 / 0
peripheral blood	16%	504.73	151 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

III. Associated gene sets

GO_0005634	Cellular component	nucleus
GO_0005515	Molecular function	protein binding

IV. Literature review

[source]

Gene name	TCEAL4
Protein name	Transcription elongation factor A protein-like 4 (TCEA-like protein 4) (Transcription elongation factor S-II protein-like 4) Transcription elongation factor A like 4 Epididymis secretory sperm binding protein (Transcription elongation factor A (SII)-like 4, isoform CRA_b)
Synonyms	hCG_1657259 NPD017
Description	FUNCTION: May be involved in transcriptional regulation.
Accessions	ENST00000490644.5 ENST00000415568.2 [Q96EI5-1] D6RCE9 ENST00000425011.1 ENST00000434216.2 ENST00000468024.5 [Q96EI5-1] J3KQY4 ENST00000469586.1 ENST00000494801.5 [Q96EI5-1] ENST00000459722.1 D6RHZ1 D6RIH3 Q96EI5 ENST00000472745.1 [Q96EI5-1] ENST00000372629.4 [Q96EI5-2] D6RD44 A0A384NKK0 ENST00000472484.6 [Q96EI5-1]

TCEAL4 report

I. Expression across cell types

II. Expression across tissues

III. Associated gene sets

IV. Literature review