Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| B cell | 41 studies | 39% ± 14% | |
| fibroblast | 34 studies | 24% ± 9% | |
| naive B cell | 20 studies | 36% ± 15% | |
| memory B cell | 19 studies | 40% ± 17% | |
| ciliated cell | 19 studies | 46% ± 14% | |
| plasmacytoid dendritic cell | 17 studies | 37% ± 13% | |
| endothelial cell | 17 studies | 26% ± 9% | |
| epithelial cell | 13 studies | 34% ± 17% | |
| goblet cell | 11 studies | 48% ± 17% | |
| type II pneumocyte | 10 studies | 24% ± 11% | |
| club cell | 10 studies | 31% ± 13% | |
| conventional dendritic cell | 9 studies | 27% ± 12% | |
| macrophage | 9 studies | 21% ± 4% | |
| oligodendrocyte | 9 studies | 29% ± 9% | |
| respiratory goblet cell | 8 studies | 39% ± 12% | |
| secretory cell | 8 studies | 28% ± 11% | |
| astrocyte | 8 studies | 28% ± 10% | |
| adipocyte | 8 studies | 22% ± 6% | |
| type I pneumocyte | 7 studies | 24% ± 7% | |
| GABAergic neuron | 7 studies | 36% ± 20% | |
| connective tissue cell | 7 studies | 21% ± 4% | |
| precursor B cell | 6 studies | 37% ± 11% | |
| basal cell | 6 studies | 38% ± 14% | |
| myofibroblast cell | 6 studies | 18% ± 1% | |
| non-classical monocyte | 5 studies | 25% ± 7% | |
| neuron | 5 studies | 33% ± 14% | |
| glutamatergic neuron | 5 studies | 47% ± 21% | |
| adventitial cell | 5 studies | 30% ± 4% | |
| hepatocyte | 5 studies | 64% ± 11% | |
| oligodendrocyte precursor cell | 5 studies | 28% ± 10% | |
| abnormal cell | 5 studies | 35% ± 14% | |
| monocyte | 5 studies | 20% ± 4% | |
| deuterosomal cell | 4 studies | 37% ± 8% | |
| duct epithelial cell | 4 studies | 28% ± 10% | |
| classical monocyte | 4 studies | 25% ± 7% | |
| kidney loop of Henle epithelial cell | 4 studies | 19% ± 4% | |
| retinal bipolar neuron | 4 studies | 30% ± 13% | |
| pericyte | 4 studies | 22% ± 2% | |
| smooth muscle cell | 4 studies | 19% ± 1% | |
| myeloid cell | 4 studies | 26% ± 6% | |
| brush cell | 4 studies | 30% ± 13% | |
| immature B cell | 4 studies | 58% ± 15% | |
| retinal rod cell | 4 studies | 19% ± 2% | |
| mucus secreting cell | 4 studies | 44% ± 16% | |
| germinal center B cell | 4 studies | 56% ± 10% | |
| luminal hormone-sensing cell of mammary gland | 4 studies | 53% ± 4% | |
| luminal cell of prostate epithelium | 4 studies | 51% ± 10% | |
| microglial cell | 4 studies | 22% ± 5% | |
| alveolar macrophage | 4 studies | 21% ± 5% | |
| interneuron | 4 studies | 41% ± 20% | |
| ionocyte | 3 studies | 27% ± 10% | |
| squamous epithelial cell | 3 studies | 40% ± 25% | |
| capillary endothelial cell | 3 studies | 16% ± 1% | |
| glomerular endothelial cell | 3 studies | 22% ± 1% | |
| amacrine cell | 3 studies | 32% ± 11% | |
| retina horizontal cell | 3 studies | 28% ± 5% | |
| retinal cone cell | 3 studies | 32% ± 10% | |
| lymphocyte | 3 studies | 17% ± 2% | |
| Mueller cell | 3 studies | 28% ± 7% | |
| rod bipolar cell | 3 studies | 28% ± 7% | |
| endothelial cell of vascular tree | 3 studies | 19% ± 3% | |
| endothelial cell of lymphatic vessel | 3 studies | 19% ± 4% | |
| dendritic cell | 3 studies | 38% ± 13% | |
| enteroendocrine cell | 3 studies | 30% ± 10% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| lung | 12 studies | 28% ± 14% | |
| brain | 9 studies | 33% ± 17% | |
| eye | 6 studies | 25% ± 7% | |
| intestine | 5 studies | 21% ± 5% | |
| breast | 4 studies | 17% ± 1% | |
| liver | 4 studies | 29% ± 8% | |
| adipose | 4 studies | 27% ± 6% | |
| peripheral blood | 3 studies | 26% ± 7% | |
| prostate | 3 studies | 19% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| prostate | 100% | 5243.48 | 245 / 245 | 100% | 132.74 | 502 / 502 |
| brain | 100% | 3460.19 | 2637 / 2642 | 99% | 40.49 | 699 / 705 |
| pancreas | 100% | 4063.93 | 328 / 328 | 99% | 54.28 | 176 / 178 |
| liver | 100% | 9698.24 | 226 / 226 | 98% | 73.00 | 399 / 406 |
| thymus | 100% | 3905.89 | 653 / 653 | 98% | 90.77 | 592 / 605 |
| breast | 100% | 4221.83 | 459 / 459 | 98% | 142.22 | 1093 / 1118 |
| lung | 100% | 3652.42 | 577 / 578 | 96% | 55.94 | 1105 / 1155 |
| adrenal gland | 100% | 11121.72 | 258 / 258 | 95% | 46.41 | 218 / 230 |
| kidney | 100% | 3078.19 | 89 / 89 | 94% | 39.06 | 850 / 901 |
| intestine | 100% | 4239.48 | 966 / 966 | 88% | 33.69 | 463 / 527 |
| bladder | 100% | 3925.52 | 21 / 21 | 88% | 33.71 | 441 / 504 |
| esophagus | 100% | 3447.13 | 1445 / 1445 | 85% | 24.59 | 155 / 183 |
| uterus | 100% | 3406.79 | 170 / 170 | 84% | 32.25 | 387 / 459 |
| stomach | 100% | 3597.85 | 359 / 359 | 84% | 24.96 | 239 / 286 |
| ovary | 100% | 3774.43 | 180 / 180 | 75% | 20.99 | 321 / 430 |
| skin | 99% | 3199.56 | 1797 / 1809 | 70% | 18.40 | 329 / 472 |
| adipose | 100% | 4026.66 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| blood vessel | 100% | 5171.02 | 1335 / 1335 | 0% | 0 | 0 / 0 |
| spleen | 100% | 3260.70 | 241 / 241 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 100% | 31.53 | 1 / 1 |
| tonsil | 0% | 0 | 0 / 0 | 91% | 34.48 | 41 / 45 |
| heart | 86% | 1350.79 | 739 / 861 | 0% | 0 | 0 / 0 |
| peripheral blood | 71% | 1901.89 | 660 / 929 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 59% | 35.41 | 17 / 29 |
| muscle | 52% | 484.78 | 415 / 803 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 48% | 11.67 | 38 / 80 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0001835 | Biological process | blastocyst hatching |
| GO_0005783 | Cellular component | endoplasmic reticulum |
| GO_0005789 | Cellular component | endoplasmic reticulum membrane |
| GO_0005515 | Molecular function | protein binding |
| Gene name | SMIM14 |
| Protein name | Small integral membrane protein 14 |
| Synonyms | C4orf34 |
| Description | |
| Accessions | ENST00000511809.5 ENST00000505729.1 Q96QK8 D6RDB1 ENST00000295958.10 ENST00000507613.5 D6RGZ0 D6R9U3 |