Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1478.49 | 1445 / 1445 | 100% | 13.48 | 183 / 183 |
ovary | 100% | 2389.39 | 180 / 180 | 100% | 12.54 | 430 / 430 |
prostate | 100% | 1622.68 | 245 / 245 | 100% | 14.75 | 501 / 502 |
lung | 100% | 1858.25 | 578 / 578 | 99% | 12.06 | 1148 / 1155 |
breast | 100% | 1775.82 | 459 / 459 | 99% | 16.55 | 1110 / 1118 |
thymus | 100% | 1670.58 | 653 / 653 | 99% | 14.86 | 600 / 605 |
brain | 99% | 1312.58 | 2625 / 2642 | 100% | 14.45 | 703 / 705 |
pancreas | 100% | 1127.80 | 328 / 328 | 99% | 11.09 | 176 / 178 |
intestine | 100% | 1911.07 | 966 / 966 | 99% | 12.54 | 520 / 527 |
stomach | 100% | 1166.40 | 359 / 359 | 98% | 13.01 | 281 / 286 |
bladder | 100% | 1747.33 | 21 / 21 | 98% | 10.86 | 494 / 504 |
uterus | 100% | 2240.86 | 170 / 170 | 97% | 11.58 | 447 / 459 |
kidney | 100% | 912.06 | 89 / 89 | 95% | 12.37 | 856 / 901 |
adrenal gland | 100% | 1257.40 | 258 / 258 | 93% | 7.58 | 215 / 230 |
skin | 100% | 1659.19 | 1809 / 1809 | 92% | 9.97 | 434 / 472 |
liver | 100% | 606.07 | 225 / 226 | 63% | 3.75 | 254 / 406 |
adipose | 100% | 1712.16 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1731.76 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 10.88 | 29 / 29 |
muscle | 100% | 1345.40 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 1750.47 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 4.00 | 1 / 1 |
peripheral blood | 99% | 2111.84 | 916 / 929 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 11.12 | 44 / 45 |
heart | 97% | 791.88 | 837 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 64% | 4.46 | 51 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006338 | Biological process | chromatin remodeling |
GO_0005634 | Cellular component | nucleus |
GO_0046872 | Molecular function | metal ion binding |
GO_0035575 | Molecular function | histone H4K20 demethylase activity |
Gene name | RSBN1 |
Protein name | Round spermatid basic protein 1 Lysine-specific demethylase 9 (KDM9) (EC 1.14.11.-) (Round spermatid basic protein 1) |
Synonyms | hCG_38641 |
Description | FUNCTION: Histone demethylase that specifically demethylates dimethylated 'Lys-20' of histone H4 (H4K20me2), thereby modulating chromosome architecture. . |
Accessions | ENST00000261441.9 [Q5VWQ0-1] ENST00000612242.4 [Q5VWQ0-1] A0A087WWP8 ENST00000476412.5 Q5VWQ0 A0A0C4DH79 ENST00000615321.1 |