RIN3 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
natural killer cell	29 studies	25% ± 9%	Explore
classical monocyte	21 studies	30% ± 11%	Explore
non-classical monocyte	20 studies	36% ± 15%	Explore
macrophage	20 studies	34% ± 19%	Explore
monocyte	18 studies	30% ± 15%	Explore
mast cell	15 studies	30% ± 11%	Explore
CD16-positive, CD56-dim natural killer cell, human	14 studies	30% ± 9%	Explore
CD16-negative, CD56-bright natural killer cell, human	14 studies	30% ± 11%	Explore
conventional dendritic cell	12 studies	30% ± 15%	Explore
microglial cell	12 studies	51% ± 18%	Explore
dendritic cell	11 studies	36% ± 12%	Explore
myeloid cell	11 studies	36% ± 15%	Explore
endothelial cell	10 studies	23% ± 9%	Explore
gamma-delta T cell	8 studies	23% ± 4%	Explore
mature NK T cell	6 studies	26% ± 7%	Explore
effector memory CD8-positive, alpha-beta T cell	5 studies	20% ± 3%	Explore
T cell	5 studies	18% ± 3%	Explore
innate lymphoid cell	5 studies	24% ± 4%	Explore
endothelial cell of lymphatic vessel	5 studies	24% ± 8%	Explore
CD8-positive, alpha-beta T cell	5 studies	17% ± 2%	Explore
mononuclear phagocyte	4 studies	34% ± 9%	Explore
lymphocyte	4 studies	28% ± 8%	Explore
alveolar macrophage	4 studies	36% ± 12%	Explore
hematopoietic precursor cell	3 studies	41% ± 16%	Explore
CD4-positive, alpha-beta T cell	3 studies	17% ± 1%	Explore
oligodendrocyte precursor cell	3 studies	24% ± 6%	Explore
B cell	3 studies	23% ± 4%	Explore
naive B cell	3 studies	15% ± 0%	Explore
abnormal cell	3 studies	22% ± 4%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
peripheral blood	10 studies	21% ± 5%	Explore
brain	4 studies	21% ± 5%	Explore
lung	3 studies	19% ± 4%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
ovary	99%	1576.46	179 / 180	98%	11.58	420 / 430
intestine	100%	4055.11	966 / 966	97%	13.30	510 / 527
skin	96%	1554.70	1742 / 1809	99%	25.64	469 / 472
lung	100%	4939.28	578 / 578	95%	12.59	1101 / 1155
uterus	100%	2968.40	170 / 170	95%	11.33	435 / 459
esophagus	98%	1862.52	1422 / 1445	96%	14.12	176 / 183
breast	100%	2180.83	459 / 459	94%	8.73	1053 / 1118
bladder	100%	2924.62	21 / 21	93%	10.46	469 / 504
thymus	99%	1311.01	646 / 653	94%	9.17	567 / 605
liver	100%	2007.97	225 / 226	91%	8.78	368 / 406
kidney	97%	1256.87	86 / 89	92%	13.08	830 / 901
prostate	100%	2277.93	244 / 245	83%	5.52	415 / 502
stomach	79%	1357.62	284 / 359	99%	14.57	283 / 286
adrenal gland	100%	3441.30	258 / 258	70%	9.16	161 / 230
brain	47%	412.14	1242 / 2642	96%	12.43	678 / 705
pancreas	17%	144.50	57 / 328	96%	12.86	171 / 178
adipose	100%	2864.38	1204 / 1204	0%	0	0 / 0
eye	0%	0	0 / 0	100%	30.00	80 / 80
peripheral blood	100%	19391.03	929 / 929	0%	0	0 / 0
spleen	100%	8690.93	241 / 241	0%	0	0 / 0
blood vessel	100%	2785.51	1330 / 1335	0%	0	0 / 0
heart	99%	1428.69	851 / 861	0%	0	0 / 0
tonsil	0%	0	0 / 0	96%	10.00	43 / 45
lymph node	0%	0	0 / 0	90%	13.04	26 / 29
muscle	29%	209.18	231 / 803	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1