Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 4752.41 | 1445 / 1445 | 100% | 54.66 | 183 / 183 |
ovary | 100% | 3934.44 | 180 / 180 | 100% | 38.68 | 430 / 430 |
lung | 100% | 3719.61 | 578 / 578 | 100% | 51.12 | 1154 / 1155 |
breast | 100% | 4436.68 | 459 / 459 | 100% | 73.57 | 1117 / 1118 |
brain | 100% | 5187.01 | 2642 / 2642 | 100% | 68.45 | 704 / 705 |
prostate | 100% | 4635.66 | 245 / 245 | 100% | 77.30 | 501 / 502 |
adrenal gland | 100% | 7214.08 | 258 / 258 | 100% | 60.98 | 229 / 230 |
uterus | 100% | 4165.40 | 170 / 170 | 100% | 41.47 | 457 / 459 |
thymus | 100% | 4918.29 | 653 / 653 | 100% | 63.92 | 602 / 605 |
bladder | 100% | 4040.19 | 21 / 21 | 99% | 39.97 | 500 / 504 |
pancreas | 100% | 2297.39 | 328 / 328 | 99% | 35.53 | 176 / 178 |
stomach | 100% | 3890.06 | 359 / 359 | 99% | 34.19 | 282 / 286 |
kidney | 100% | 3466.44 | 89 / 89 | 98% | 41.17 | 885 / 901 |
intestine | 100% | 4289.27 | 966 / 966 | 98% | 31.86 | 517 / 527 |
liver | 100% | 2858.03 | 226 / 226 | 95% | 25.62 | 386 / 406 |
skin | 100% | 5474.52 | 1809 / 1809 | 92% | 29.64 | 436 / 472 |
adipose | 100% | 4342.65 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 4944.07 | 1335 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 3273.48 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 3275.86 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 41.15 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 25.96 | 1 / 1 |
heart | 97% | 3329.10 | 837 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 97% | 21.79 | 28 / 29 |
peripheral blood | 85% | 2052.84 | 786 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 78% | 18.15 | 62 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0071786 | Biological process | endoplasmic reticulum tubular network organization |
GO_0006886 | Biological process | intracellular protein transport |
GO_0001654 | Biological process | eye development |
GO_0034389 | Biological process | lipid droplet organization |
GO_0007264 | Biological process | small GTPase-mediated signal transduction |
GO_0007420 | Biological process | brain development |
GO_0016324 | Cellular component | apical plasma membrane |
GO_0030667 | Cellular component | secretory granule membrane |
GO_0005886 | Cellular component | plasma membrane |
GO_0005811 | Cellular component | lipid droplet |
GO_0012505 | Cellular component | endomembrane system |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0071782 | Cellular component | endoplasmic reticulum tubular network |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0005829 | Cellular component | cytosol |
GO_0019003 | Molecular function | GDP binding |
GO_0005525 | Molecular function | GTP binding |
GO_0005515 | Molecular function | protein binding |
GO_0003924 | Molecular function | GTPase activity |
Gene name | RAB18 |
Protein name | small monomeric GTPase (EC 3.6.5.2) RAB18, member RAS oncogene family Ras-related protein Rab-18 |
Synonyms | |
Description | FUNCTION: The small GTPases Rab are key regulators of intracellular membrane trafficking, from the formation of transport vesicles to their fusion with membranes . Rabs cycle between an inactive GDP-bound form and an active GTP-bound form that is able to recruit to membranes different sets of downstream effectors directly responsible for vesicle formation, movement, tethering and fusion . Required for the localization of ZFYVE1 to lipid droplets and for its function in mediating the formation of endoplasmic reticulum-lipid droplets (ER-LD) contacts . Also required for maintaining endoplasmic reticulum structure . Plays a role in apical endocytosis/recycling (By similarity). Plays a key role in eye and brain development and neurodegeneration . . FUNCTION: The small GTPases Rab are key regulators of intracellular membrane trafficking, from the formation of transport vesicles to their fusion with membranes. Rabs cycle between active GTP-bound and inactive GDP-bound states. In their active state, drive transport of vesicular carriers from donor organelles to acceptor organelles to regulate the membrane traffic that maintains organelle identity and morphology. Required for protein transport from the endoplasmic reticulum to the Golgi complex. Regulates the compacted morphology of the Golgi. . |
Accessions | ENST00000684393.1 A0A804HK95 ENST00000356940.11 [Q9NP72-1] A0A804HL33 A0A804HKV1 ENST00000683538.1 A0A804HKK5 ENST00000683797.1 ENST00000682173.1 ENST00000611151.5 ENST00000682347.1 A0A8C8NLQ3 A0A804HIM2 ENST00000682181.1 A0A804HIB9 ENST00000682389.1 [Q9NP72-3] ENST00000683419.1 A0A804HJJ8 Q9NP72 A0A804HKK8 A0A804HL88 ENST00000423465.2 A0A804HLK4 A0A087X163 ENST00000684191.1 ENST00000682082.1 [Q9NP72-1] ENST00000682852.1 ENST00000683030.1 ENST00000684457.1 A0A804HL37 B7Z4P9 ENST00000684501.1 Q5W0J0 A0A804HIY1 ENST00000683816.1 ENST00000683915.1 ENST00000535776.6 ENST00000683866.1 ENST00000683755.1 ENST00000683924.1 A0A804HLG5 H0Y6T8 ENST00000621805.5 [Q9NP72-2] ENST00000682963.1 ENST00000375802.7 A0A804HJ83 A0A804HLH7 ENST00000682668.1 A0A804HKH8 |