Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 20 studies | 53% ± 22% | |
oligodendrocyte | 16 studies | 48% ± 14% | |
oligodendrocyte precursor cell | 16 studies | 63% ± 21% | |
glutamatergic neuron | 13 studies | 59% ± 23% | |
endothelial cell | 13 studies | 27% ± 17% | |
GABAergic neuron | 11 studies | 52% ± 22% | |
epithelial cell | 9 studies | 31% ± 15% | |
adipocyte | 8 studies | 34% ± 10% | |
neuron | 7 studies | 51% ± 19% | |
interneuron | 7 studies | 56% ± 23% | |
retinal cone cell | 7 studies | 53% ± 25% | |
retinal rod cell | 7 studies | 47% ± 27% | |
endothelial cell of lymphatic vessel | 7 studies | 41% ± 9% | |
type I pneumocyte | 6 studies | 43% ± 15% | |
retinal ganglion cell | 6 studies | 32% ± 17% | |
ciliated cell | 6 studies | 33% ± 12% | |
Mueller cell | 6 studies | 49% ± 19% | |
type II pneumocyte | 6 studies | 51% ± 16% | |
cardiac muscle cell | 5 studies | 53% ± 16% | |
club cell | 5 studies | 41% ± 18% | |
smooth muscle cell | 5 studies | 21% ± 3% | |
granule cell | 4 studies | 45% ± 14% | |
microglial cell | 4 studies | 45% ± 13% | |
pericyte | 4 studies | 35% ± 14% | |
retinal bipolar neuron | 4 studies | 39% ± 21% | |
differentiation-committed oligodendrocyte precursor | 3 studies | 52% ± 2% | |
GABAergic interneuron | 3 studies | 52% ± 1% | |
glial cell | 3 studies | 33% ± 13% | |
OFF-bipolar cell | 3 studies | 47% ± 15% | |
ON-bipolar cell | 3 studies | 41% ± 17% | |
rod bipolar cell | 3 studies | 49% ± 21% | |
retinal pigment epithelial cell | 3 studies | 53% ± 18% | |
abnormal cell | 3 studies | 30% ± 19% | |
neural progenitor cell | 3 studies | 51% ± 19% | |
ependymal cell | 3 studies | 58% ± 14% | |
respiratory goblet cell | 3 studies | 51% ± 20% | |
renal principal cell | 3 studies | 43% ± 16% | |
mucus secreting cell | 3 studies | 52% ± 13% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 99% | 1481.03 | 179 / 180 | 98% | 6.85 | 420 / 430 |
brain | 100% | 3305.12 | 2640 / 2642 | 96% | 16.03 | 679 / 705 |
pancreas | 100% | 1557.15 | 328 / 328 | 91% | 6.44 | 162 / 178 |
kidney | 99% | 1077.15 | 88 / 89 | 92% | 7.85 | 825 / 901 |
adrenal gland | 100% | 3136.78 | 258 / 258 | 90% | 7.45 | 208 / 230 |
thymus | 99% | 1917.37 | 649 / 653 | 90% | 11.17 | 544 / 605 |
prostate | 85% | 710.24 | 208 / 245 | 99% | 9.28 | 498 / 502 |
breast | 87% | 1016.31 | 400 / 459 | 90% | 8.45 | 1002 / 1118 |
stomach | 100% | 1920.84 | 358 / 359 | 68% | 4.51 | 194 / 286 |
lung | 95% | 1134.08 | 551 / 578 | 70% | 5.81 | 806 / 1155 |
intestine | 97% | 2629.56 | 941 / 966 | 66% | 4.28 | 350 / 527 |
bladder | 90% | 1182.33 | 19 / 21 | 56% | 3.65 | 283 / 504 |
uterus | 82% | 986.46 | 139 / 170 | 36% | 2.51 | 163 / 459 |
esophagus | 69% | 1494.45 | 996 / 1445 | 39% | 2.89 | 72 / 183 |
ureter | 0% | 0 | 0 / 0 | 100% | 3.52 | 1 / 1 |
muscle | 99% | 1224.59 | 796 / 803 | 0% | 0 | 0 / 0 |
blood vessel | 93% | 1130.06 | 1243 / 1335 | 0% | 0 | 0 / 0 |
heart | 89% | 1130.93 | 770 / 861 | 0% | 0 | 0 / 0 |
spleen | 87% | 692.90 | 209 / 241 | 0% | 0 | 0 / 0 |
adipose | 77% | 583.05 | 933 / 1204 | 0% | 0 | 0 / 0 |
skin | 13% | 78.08 | 232 / 1809 | 60% | 4.53 | 281 / 472 |
liver | 1% | 5.54 | 3 / 226 | 29% | 1.77 | 117 / 406 |
eye | 0% | 0 | 0 / 0 | 30% | 1.90 | 24 / 80 |
lymph node | 0% | 0 | 0 / 0 | 7% | 0.49 | 2 / 29 |
tonsil | 0% | 0 | 0 / 0 | 2% | 0.07 | 1 / 45 |
peripheral blood | 0% | 0.52 | 1 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0050804 | Biological process | modulation of chemical synaptic transmission |
GO_0019722 | Biological process | calcium-mediated signaling |
GO_0007015 | Biological process | actin filament organization |
GO_0031175 | Biological process | neuron projection development |
GO_0030175 | Cellular component | filopodium |
GO_0015629 | Cellular component | actin cytoskeleton |
GO_0030425 | Cellular component | dendrite |
GO_0030864 | Cellular component | cortical actin cytoskeleton |
GO_0043197 | Cellular component | dendritic spine |
GO_0014069 | Cellular component | postsynaptic density |
GO_0005737 | Cellular component | cytoplasm |
GO_0051015 | Molecular function | actin filament binding |
GO_0005515 | Molecular function | protein binding |
Gene name | PPP1R9A |
Protein name | HCG1741805, isoform CRA_c (Protein phosphatase 1, regulatory (Inhibitor) subunit 9A) Protein phosphatase 1 regulatory subunit 9A PPP1R9A protein Neurabin-1 (Neurabin-I) (Neural tissue-specific F-actin-binding protein I) (Protein phosphatase 1 regulatory subunit 9A) |
Synonyms | KIAA1222 hCG_1741805 tcag7.281 |
Description | FUNCTION: Binds to actin filaments (F-actin) and shows cross-linking activity. Binds along the sides of the F-actin. May be involved in neurite formation. Inhibits protein phosphatase 1-alpha activity (By similarity). . |
Accessions | Q9ULJ8 ENST00000289495.7 [Q9ULJ8-5] ENST00000433881.5 [Q9ULJ8-1] ENST00000424654.5 [Q9ULJ8-4] ENST00000340694.8 [Q9ULJ8-1] ENST00000433360.6 [Q9ULJ8-3] A4D1I0 C9J730 ENST00000456331.6 [Q9ULJ8-4] ENST00000422324.1 B7ZLX4 C9J3G5 ENST00000413325.1 |