Name | Number of supported studies | Average coverage | |
---|---|---|---|
B cell | 12 studies | 17% ± 2% | |
endothelial cell of lymphatic vessel | 12 studies | 28% ± 7% | |
T follicular helper cell | 5 studies | 20% ± 4% | |
regulatory T cell | 4 studies | 16% ± 0% | |
macrophage | 4 studies | 21% ± 6% | |
non-classical monocyte | 3 studies | 21% ± 7% | |
lymphocyte | 3 studies | 18% ± 2% | |
naive B cell | 3 studies | 19% ± 1% | |
astrocyte | 3 studies | 26% ± 3% |
Insufficient scRNA-seq data for expression of NFATC1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 1226.09 | 244 / 245 | 98% | 6.15 | 492 / 502 |
breast | 100% | 2179.99 | 459 / 459 | 95% | 8.77 | 1057 / 1118 |
skin | 100% | 1565.63 | 1808 / 1809 | 92% | 10.70 | 436 / 472 |
lung | 100% | 2376.63 | 577 / 578 | 92% | 6.99 | 1066 / 1155 |
kidney | 98% | 793.04 | 87 / 89 | 90% | 6.55 | 811 / 901 |
thymus | 100% | 1513.34 | 652 / 653 | 84% | 6.08 | 506 / 605 |
uterus | 100% | 1498.24 | 170 / 170 | 82% | 6.26 | 377 / 459 |
esophagus | 86% | 1319.88 | 1243 / 1445 | 95% | 9.56 | 174 / 183 |
ovary | 96% | 1317.54 | 173 / 180 | 82% | 5.30 | 353 / 430 |
bladder | 100% | 1348.10 | 21 / 21 | 58% | 3.39 | 291 / 504 |
stomach | 88% | 793.02 | 315 / 359 | 67% | 4.91 | 192 / 286 |
pancreas | 56% | 287.42 | 185 / 328 | 91% | 10.01 | 162 / 178 |
intestine | 97% | 1740.14 | 938 / 966 | 50% | 3.34 | 265 / 527 |
brain | 62% | 357.20 | 1642 / 2642 | 77% | 4.80 | 546 / 705 |
adrenal gland | 95% | 760.32 | 246 / 258 | 31% | 1.52 | 72 / 230 |
adipose | 100% | 2244.31 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 13.50 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 56.28 | 29 / 29 |
muscle | 100% | 3524.80 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 3356.39 | 241 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2240.35 | 1334 / 1335 | 0% | 0 | 0 / 0 |
heart | 99% | 1500.12 | 853 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 96% | 1714.53 | 895 / 929 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 93% | 7.77 | 42 / 45 |
liver | 22% | 107.13 | 50 / 226 | 35% | 1.70 | 143 / 406 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0071560 | Biological process | cellular response to transforming growth factor beta stimulus |
GO_0043501 | Biological process | skeletal muscle adaptation |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0001816 | Biological process | cytokine production |
GO_0033173 | Biological process | calcineurin-NFAT signaling cascade |
GO_0003180 | Biological process | aortic valve morphogenesis |
GO_0014850 | Biological process | response to muscle activity |
GO_1905064 | Biological process | negative regulation of vascular associated smooth muscle cell differentiation |
GO_0042060 | Biological process | wound healing |
GO_1903131 | Biological process | mononuclear cell differentiation |
GO_0071356 | Biological process | cellular response to tumor necrosis factor |
GO_0035556 | Biological process | intracellular signal transduction |
GO_0045893 | Biological process | positive regulation of DNA-templated transcription |
GO_2000573 | Biological process | positive regulation of DNA biosynthetic process |
GO_0003184 | Biological process | pulmonary valve morphogenesis |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0016528 | Cellular component | sarcoplasm |
GO_0048471 | Cellular component | perinuclear region of cytoplasm |
GO_0005654 | Cellular component | nucleoplasm |
GO_0016604 | Cellular component | nuclear body |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0000785 | Cellular component | chromatin |
GO_0005667 | Cellular component | transcription regulator complex |
GO_0005634 | Cellular component | nucleus |
GO_0008134 | Molecular function | transcription factor binding |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0001228 | Molecular function | DNA-binding transcription activator activity, RNA polymerase II-specific |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0048273 | Molecular function | mitogen-activated protein kinase p38 binding |
GO_0003676 | Molecular function | nucleic acid binding |
GO_1990837 | Molecular function | sequence-specific double-stranded DNA binding |
GO_0061629 | Molecular function | RNA polymerase II-specific DNA-binding transcription factor binding |
GO_0001223 | Molecular function | transcription coactivator binding |
GO_0003700 | Molecular function | DNA-binding transcription factor activity |
GO_0005528 | Molecular function | FK506 binding |
GO_0005515 | Molecular function | protein binding |
Gene name | NFATC1 |
Protein name | Nuclear factor of activated T cells 1 Nuclear factor of activated T-cells, cytoplasmic 1 (NF-ATc1) (NFATc1) (NFAT transcription complex cytosolic component) (NF-ATc) (NFATc) Alternative protein NFATC1 |
Synonyms | NFAT2 NFATC |
Description | FUNCTION: Plays a role in the inducible expression of cytokine genes in T-cells, especially in the induction of the IL-2 or IL-4 gene transcription. Also controls gene expression in embryonic cardiac cells. Could regulate not only the activation and proliferation but also the differentiation and programmed death of T-lymphocytes as well as lymphoid and non-lymphoid cells . Required for osteoclastogenesis and regulates many genes important for osteoclast differentiation and function (By similarity). . |
Accessions | O95644 ENST00000545796.5 ENST00000329101.8 [O95644-6] ENST00000318065.9 [O95644-5] ENST00000542384.5 [O95644-10] ENST00000587635.5 ENST00000590313.5 K7ER53 K7EQ04 F5H4S8 ENST00000427363.7 [O95644-1] ENST00000591814.5 [O95644-2] ENST00000586434.1 [O95644-11] L8ECN7 ENST00000397790.6 [O95644-17] ENST00000592223.5 [O95644-3] ENST00000253506.9 [O95644-4] |