Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
lung | 100% | 7183.71 | 578 / 578 | 97% | 11.40 | 1126 / 1155 |
breast | 89% | 1000.22 | 409 / 459 | 97% | 9.17 | 1082 / 1118 |
intestine | 93% | 1538.08 | 895 / 966 | 90% | 6.61 | 476 / 527 |
prostate | 93% | 1152.06 | 229 / 245 | 84% | 4.31 | 423 / 502 |
thymus | 87% | 910.43 | 565 / 653 | 90% | 6.68 | 542 / 605 |
liver | 98% | 1167.56 | 221 / 226 | 74% | 4.42 | 301 / 406 |
bladder | 90% | 1389.05 | 19 / 21 | 79% | 6.69 | 400 / 504 |
stomach | 76% | 769.05 | 273 / 359 | 92% | 7.84 | 264 / 286 |
uterus | 78% | 645.72 | 132 / 170 | 89% | 6.96 | 410 / 459 |
kidney | 73% | 921.42 | 65 / 89 | 93% | 12.62 | 842 / 901 |
esophagus | 73% | 633.31 | 1051 / 1445 | 86% | 5.62 | 157 / 183 |
adrenal gland | 97% | 1182.62 | 249 / 258 | 58% | 2.82 | 133 / 230 |
brain | 42% | 412.54 | 1105 / 2642 | 98% | 12.44 | 690 / 705 |
skin | 37% | 246.82 | 673 / 1809 | 91% | 11.06 | 429 / 472 |
pancreas | 28% | 260.90 | 91 / 328 | 93% | 10.75 | 166 / 178 |
ovary | 35% | 257.96 | 63 / 180 | 83% | 5.66 | 358 / 430 |
lymph node | 0% | 0 | 0 / 0 | 100% | 37.38 | 29 / 29 |
spleen | 100% | 20852.20 | 241 / 241 | 0% | 0 | 0 / 0 |
adipose | 99% | 2069.57 | 1189 / 1204 | 0% | 0 | 0 / 0 |
peripheral blood | 94% | 57383.85 | 874 / 929 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 93% | 12.25 | 42 / 45 |
heart | 67% | 680.58 | 577 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 66% | 919.86 | 887 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 57% | 2.87 | 46 / 80 |
muscle | 5% | 31.82 | 44 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007015 | Biological process | actin filament organization |
GO_0006897 | Biological process | endocytosis |
GO_0008150 | Biological process | biological_process |
GO_0005902 | Cellular component | microvillus |
GO_0015629 | Cellular component | actin cytoskeleton |
GO_0005829 | Cellular component | cytosol |
GO_0005886 | Cellular component | plasma membrane |
GO_0016461 | Cellular component | unconventional myosin complex |
GO_0005737 | Cellular component | cytoplasm |
GO_0000146 | Molecular function | microfilament motor activity |
GO_0005516 | Molecular function | calmodulin binding |
GO_0051015 | Molecular function | actin filament binding |
GO_0005515 | Molecular function | protein binding |
GO_0003779 | Molecular function | actin binding |
GO_0005524 | Molecular function | ATP binding |
Gene name | MYO1F |
Protein name | Myosin-ID Myosin IF MYO1F variant protein Unconventional myosin-If (Myosin-Ie) |
Synonyms | protein variant |
Description | FUNCTION: Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. Their highly divergent tails are presumed to bind to membranous compartments, which would be moved relative to actin filaments (By similarity). . |
Accessions | O00160 ENST00000613525.4 ENST00000598321.5 Q92827 ENST00000596675.1 M0QXU2 M0QY89 ENST00000602136.2 Q4LE34 M0QXU5 ENST00000644032.2 |