Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 5 studies | 19% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
bladder | 100% | 2217.19 | 21 / 21 | 100% | 24.19 | 504 / 504 |
esophagus | 100% | 2146.49 | 1445 / 1445 | 100% | 16.39 | 183 / 183 |
ovary | 100% | 2174.28 | 180 / 180 | 100% | 21.01 | 430 / 430 |
pancreas | 100% | 1476.92 | 328 / 328 | 100% | 22.62 | 178 / 178 |
prostate | 100% | 2867.24 | 245 / 245 | 100% | 24.31 | 502 / 502 |
skin | 100% | 1690.18 | 1809 / 1809 | 100% | 24.18 | 472 / 472 |
lung | 100% | 2004.15 | 578 / 578 | 100% | 19.33 | 1154 / 1155 |
intestine | 100% | 2705.34 | 966 / 966 | 100% | 21.93 | 526 / 527 |
uterus | 100% | 2733.92 | 170 / 170 | 100% | 23.93 | 458 / 459 |
thymus | 100% | 2781.26 | 653 / 653 | 100% | 24.47 | 603 / 605 |
stomach | 100% | 1995.55 | 359 / 359 | 100% | 20.44 | 285 / 286 |
adrenal gland | 100% | 2640.82 | 258 / 258 | 100% | 19.38 | 229 / 230 |
brain | 100% | 1192.98 | 2630 / 2642 | 100% | 23.81 | 705 / 705 |
breast | 100% | 2147.96 | 459 / 459 | 99% | 24.78 | 1112 / 1118 |
kidney | 100% | 2305.08 | 89 / 89 | 99% | 24.48 | 896 / 901 |
liver | 100% | 1297.08 | 226 / 226 | 99% | 14.24 | 400 / 406 |
adipose | 100% | 1842.70 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 21.91 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 30.00 | 29 / 29 |
spleen | 100% | 2686.88 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 19.22 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 15.48 | 1 / 1 |
blood vessel | 100% | 2271.67 | 1333 / 1335 | 0% | 0 | 0 / 0 |
heart | 99% | 1116.92 | 852 / 861 | 0% | 0 | 0 / 0 |
muscle | 98% | 862.61 | 789 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 97% | 1237.62 | 898 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0033044 | Biological process | regulation of chromosome organization |
GO_0006282 | Biological process | regulation of DNA repair |
GO_0006310 | Biological process | DNA recombination |
GO_0060382 | Biological process | regulation of DNA strand elongation |
GO_1904507 | Biological process | positive regulation of telomere maintenance in response to DNA damage |
GO_0006281 | Biological process | DNA repair |
GO_0045893 | Biological process | positive regulation of DNA-templated transcription |
GO_0045995 | Biological process | regulation of embryonic development |
GO_0006275 | Biological process | regulation of DNA replication |
GO_0006338 | Biological process | chromatin remodeling |
GO_0051726 | Biological process | regulation of cell cycle |
GO_0000723 | Biological process | telomere maintenance |
GO_0045739 | Biological process | positive regulation of DNA repair |
GO_0005730 | Cellular component | nucleolus |
GO_0005654 | Cellular component | nucleoplasm |
GO_0031011 | Cellular component | Ino80 complex |
GO_0005515 | Molecular function | protein binding |
Gene name | INO80E |
Protein name | INO80 complex subunit E (Coiled-coil domain-containing protein 95) INO80 complex subunit E |
Synonyms | CCDC95 FLJ90652 hCG_1770728 |
Description | FUNCTION: Putative regulatory component of the chromatin remodeling INO80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair. |
Accessions | H3BNM4 ENST00000567705.5 ENST00000562441.5 [Q8NBZ0-2] ENST00000562291.2 ENST00000567987.5 ENST00000563197.6 [Q8NBZ0-1] Q8NBZ0 ENST00000567254.5 I3L0W8 ENST00000567065.5 [Q8NBZ0-2] J3KNE2 I3L270 I3NI13 ENST00000304516.11 ENST00000620599.4 [Q8NBZ0-2] |