Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| pericyte | 8 studies | 24% ± 8% | |
| type II pneumocyte | 6 studies | 20% ± 4% | |
| type I pneumocyte | 6 studies | 17% ± 1% | |
| astrocyte | 6 studies | 26% ± 5% | |
| endothelial cell | 3 studies | 21% ± 5% | |
| myofibroblast cell | 3 studies | 20% ± 4% | |
| fibroblast | 3 studies | 17% ± 1% | |
| parietal epithelial cell | 3 studies | 32% ± 5% |
Insufficient scRNA-seq data for expression of GPC4 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| intestine | 100% | 4199.58 | 964 / 966 | 92% | 41.41 | 487 / 527 |
| lung | 100% | 3907.18 | 578 / 578 | 91% | 64.21 | 1050 / 1155 |
| thymus | 98% | 1568.37 | 640 / 653 | 93% | 56.27 | 560 / 605 |
| pancreas | 99% | 1458.76 | 324 / 328 | 90% | 30.24 | 160 / 178 |
| kidney | 100% | 3217.38 | 89 / 89 | 88% | 62.70 | 793 / 901 |
| stomach | 98% | 3652.81 | 352 / 359 | 86% | 41.97 | 245 / 286 |
| ovary | 100% | 2452.76 | 180 / 180 | 77% | 29.43 | 333 / 430 |
| breast | 92% | 1382.68 | 421 / 459 | 86% | 49.76 | 957 / 1118 |
| prostate | 89% | 1569.57 | 217 / 245 | 77% | 19.30 | 388 / 502 |
| bladder | 100% | 2526.76 | 21 / 21 | 63% | 28.34 | 316 / 504 |
| esophagus | 86% | 5100.40 | 1241 / 1445 | 76% | 25.61 | 139 / 183 |
| uterus | 98% | 2800.26 | 167 / 170 | 57% | 35.06 | 260 / 459 |
| brain | 48% | 474.93 | 1268 / 2642 | 88% | 27.33 | 621 / 705 |
| adrenal gland | 88% | 1775.86 | 228 / 258 | 15% | 3.67 | 35 / 230 |
| blood vessel | 100% | 5577.44 | 1335 / 1335 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 100% | 12.15 | 1 / 1 |
| adipose | 99% | 2339.76 | 1194 / 1204 | 0% | 0 | 0 / 0 |
| muscle | 97% | 1703.67 | 776 / 803 | 0% | 0 | 0 / 0 |
| skin | 54% | 610.83 | 970 / 1809 | 39% | 18.86 | 184 / 472 |
| heart | 69% | 950.58 | 592 / 861 | 0% | 0 | 0 / 0 |
| spleen | 63% | 670.79 | 151 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 40% | 14.90 | 18 / 45 |
| liver | 4% | 31.41 | 8 / 226 | 18% | 5.44 | 73 / 406 |
| peripheral blood | 6% | 124.76 | 54 / 929 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 5% | 0.56 | 4 / 80 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0098696 | Biological process | regulation of neurotransmitter receptor localization to postsynaptic specialization membrane |
| GO_0009966 | Biological process | regulation of signal transduction |
| GO_0016055 | Biological process | Wnt signaling pathway |
| GO_0099560 | Biological process | synaptic membrane adhesion |
| GO_1905606 | Biological process | regulation of presynapse assembly |
| GO_0016477 | Biological process | cell migration |
| GO_0005796 | Cellular component | Golgi lumen |
| GO_0009986 | Cellular component | cell surface |
| GO_0043202 | Cellular component | lysosomal lumen |
| GO_0098978 | Cellular component | glutamatergic synapse |
| GO_0070062 | Cellular component | extracellular exosome |
| GO_0009897 | Cellular component | external side of plasma membrane |
| GO_0045202 | Cellular component | synapse |
| GO_0062023 | Cellular component | collagen-containing extracellular matrix |
| GO_0005886 | Cellular component | plasma membrane |
| GO_0005634 | Cellular component | nucleus |
| GO_0015026 | Molecular function | coreceptor activity |
| GO_0005515 | Molecular function | protein binding |
| Gene name | GPC4 |
| Protein name | Glypican-4 (K-glypican) [Cleaved into: Secreted glypican-4] K-glypican |
| Synonyms | UNQ474/PRO937 |
| Description | FUNCTION: Cell surface proteoglycan that bears heparan sulfate. May be involved in the development of kidney tubules and of the central nervous system (By similarity). . FUNCTION: Cell surface proteoglycan. . |
| Accessions | ENST00000370828.4 [O75487-1] Q86SV6 O75487 |
