Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
bladder | 100% | 4278.76 | 21 / 21 | 100% | 18.63 | 504 / 504 |
breast | 100% | 4887.87 | 459 / 459 | 100% | 21.58 | 1118 / 1118 |
esophagus | 100% | 4285.98 | 1445 / 1445 | 100% | 24.15 | 183 / 183 |
ovary | 100% | 4120.48 | 180 / 180 | 100% | 20.82 | 430 / 430 |
pancreas | 100% | 2675.81 | 328 / 328 | 100% | 14.40 | 178 / 178 |
prostate | 100% | 4603.44 | 245 / 245 | 100% | 18.56 | 502 / 502 |
stomach | 100% | 3001.25 | 359 / 359 | 100% | 15.84 | 286 / 286 |
thymus | 100% | 4262.10 | 653 / 653 | 100% | 18.43 | 605 / 605 |
uterus | 100% | 4387.28 | 170 / 170 | 100% | 21.87 | 459 / 459 |
brain | 100% | 3732.71 | 2641 / 2642 | 100% | 19.70 | 705 / 705 |
lung | 100% | 3859.01 | 577 / 578 | 100% | 20.47 | 1155 / 1155 |
intestine | 100% | 4107.55 | 966 / 966 | 100% | 16.39 | 525 / 527 |
adrenal gland | 100% | 3215.99 | 258 / 258 | 99% | 11.01 | 228 / 230 |
kidney | 100% | 3142.99 | 89 / 89 | 99% | 12.62 | 893 / 901 |
skin | 100% | 4919.45 | 1809 / 1809 | 98% | 15.92 | 463 / 472 |
liver | 100% | 2036.35 | 226 / 226 | 96% | 9.62 | 391 / 406 |
adipose | 100% | 5183.30 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 3916.67 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 16.41 | 29 / 29 |
muscle | 100% | 3795.73 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 4130.37 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 20.85 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 10.39 | 1 / 1 |
heart | 99% | 2893.50 | 852 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 89% | 7.73 | 71 / 80 |
peripheral blood | 86% | 2135.13 | 800 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0090045 | Biological process | positive regulation of deacetylase activity |
GO_0071340 | Biological process | skeletal muscle acetylcholine-gated channel clustering |
GO_0018343 | Biological process | protein farnesylation |
GO_0035022 | Biological process | positive regulation of Rac protein signal transduction |
GO_0018344 | Biological process | protein geranylgeranylation |
GO_0090044 | Biological process | positive regulation of tubulin deacetylation |
GO_1904395 | Biological process | positive regulation of skeletal muscle acetylcholine-gated channel clustering |
GO_0007179 | Biological process | transforming growth factor beta receptor signaling pathway |
GO_0005965 | Cellular component | protein farnesyltransferase complex |
GO_0005886 | Cellular component | plasma membrane |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0005953 | Cellular component | CAAX-protein geranylgeranyltransferase complex |
GO_0005875 | Cellular component | microtubule associated complex |
GO_0004662 | Molecular function | CAAX-protein geranylgeranyltransferase activity |
GO_0060090 | Molecular function | molecular adaptor activity |
GO_0043014 | Molecular function | alpha-tubulin binding |
GO_0004660 | Molecular function | protein farnesyltransferase activity |
GO_0008017 | Molecular function | microtubule binding |
GO_0004661 | Molecular function | protein geranylgeranyltransferase activity |
GO_0005515 | Molecular function | protein binding |
GO_0030971 | Molecular function | receptor tyrosine kinase binding |
GO_0004663 | Molecular function | Rab geranylgeranyltransferase activity |
Gene name | FNTA |
Protein name | Farnesyltransferase, CAAX box, alpha Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha (EC 2.5.1.58) (EC 2.5.1.59) (CAAX farnesyltransferase subunit alpha) (FTase-alpha) (Ras proteins prenyltransferase subunit alpha) (Type I protein geranyl-geranyltransferase subunit alpha) (GGTase-I-alpha) Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha (EC 2.5.1.58) (EC 2.5.1.59) (CAAX farnesyltransferase subunit alpha) (FTase-alpha) (Ras proteins prenyltransferase subunit alpha) (Type I protein geranyl-geranyltransferase subunit alpha) |
Synonyms | hCG_1993221 |
Description | FUNCTION: Essential subunit of both the farnesyltransferase and the geranylgeranyltransferase complex. Contributes to the transfer of a farnesyl or geranylgeranyl moiety from farnesyl or geranylgeranyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins having the C-terminal sequence Cys-aliphatic-aliphatic-X. May positively regulate neuromuscular junction development downstream of MUSK via its function in RAC1 prenylation and activation. . |
Accessions | E9PK84 ENST00000525699.5 E9PN85 ENST00000529687.5 H0YCW1 ENST00000533336.1 ENST00000533998.5 E9PPM9 ENST00000533383.5 E9PQP6 ENST00000302279.8 [P49354-1] ENST00000526755.5 P49354 ENST00000531266.5 B3KVN2 |