ERGIC2 | OmnibusX

I. Expression across cell types

Name	Number of supported studies	Average coverage
fibroblast	18 studies	24% ± 10%	Explore
endothelial cell	13 studies	23% ± 7%	Explore
smooth muscle cell	13 studies	18% ± 2%	Explore
plasma cell	12 studies	33% ± 12%	Explore
pericyte	11 studies	20% ± 5%	Explore
regulatory T cell	10 studies	19% ± 3%	Explore
CD4-positive, alpha-beta T cell	9 studies	21% ± 5%	Explore
epithelial cell	9 studies	33% ± 18%	Explore
CD8-positive, alpha-beta T cell	9 studies	19% ± 5%	Explore
plasmacytoid dendritic cell	9 studies	25% ± 9%	Explore
connective tissue cell	8 studies	25% ± 10%	Explore
ciliated cell	8 studies	31% ± 14%	Explore
astrocyte	7 studies	25% ± 7%	Explore
oligodendrocyte	7 studies	26% ± 7%	Explore
oligodendrocyte precursor cell	7 studies	22% ± 7%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	6 studies	18% ± 2%	Explore
abnormal cell	6 studies	23% ± 5%	Explore
basal cell	6 studies	35% ± 16%	Explore
T follicular helper cell	6 studies	18% ± 2%	Explore
myofibroblast cell	5 studies	24% ± 3%	Explore
T cell	5 studies	19% ± 3%	Explore
neuron	5 studies	26% ± 9%	Explore
GABAergic neuron	5 studies	36% ± 14%	Explore
gamma-delta T cell	5 studies	23% ± 11%	Explore
plasmablast	4 studies	43% ± 23%	Explore
secretory cell	4 studies	28% ± 15%	Explore
effector memory CD8-positive, alpha-beta T cell	4 studies	18% ± 2%	Explore
B cell	4 studies	21% ± 4%	Explore
club cell	4 studies	21% ± 4%	Explore
retina horizontal cell	4 studies	20% ± 7%	Explore
CD8-positive, alpha-beta memory T cell	4 studies	19% ± 2%	Explore
macrophage	4 studies	20% ± 5%	Explore
glutamatergic neuron	4 studies	49% ± 16%	Explore
natural killer cell	4 studies	20% ± 3%	Explore
goblet cell	4 studies	35% ± 16%	Explore
interneuron	4 studies	35% ± 19%	Explore
CD4-positive, alpha-beta memory T cell	3 studies	19% ± 5%	Explore
pancreatic A cell	3 studies	25% ± 4%	Explore
type B pancreatic cell	3 studies	36% ± 3%	Explore
CD16-negative, CD56-bright natural killer cell, human	3 studies	18% ± 3%	Explore
conventional dendritic cell	3 studies	22% ± 7%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	3 studies	19% ± 4%	Explore
neural crest cell	3 studies	17% ± 1%	Explore
Mueller cell	3 studies	24% ± 7%	Explore
rod bipolar cell	3 studies	19% ± 1%	Explore
dendritic cell	3 studies	28% ± 8%	Explore
intestinal crypt stem cell	3 studies	17% ± 2%	Explore

II. Expression across tissues

Name	Number of supported studies	Average coverage
lung	7 studies	27% ± 12%	Explore
brain	6 studies	36% ± 15%	Explore
eye	4 studies	25% ± 6%	Explore
pancreas	3 studies	31% ± 2%	Explore
peripheral blood	3 studies	21% ± 4%	Explore
intestine	3 studies	25% ± 12%	Explore
liver	3 studies	28% ± 9%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
breast	100%	1513.48	459 / 459	100%	32.18	1118 / 1118
esophagus	100%	1681.97	1445 / 1445	100%	25.35	183 / 183
ovary	100%	1462.94	180 / 180	100%	24.30	430 / 430
prostate	100%	1699.79	245 / 245	100%	26.78	502 / 502
brain	100%	1325.04	2640 / 2642	100%	20.24	705 / 705
lung	100%	1477.46	577 / 578	100%	29.31	1155 / 1155
uterus	100%	1586.71	170 / 170	99%	24.69	456 / 459
thymus	100%	1455.08	653 / 653	99%	19.28	600 / 605
bladder	100%	1803.95	21 / 21	99%	22.26	499 / 504
kidney	100%	1210.12	89 / 89	99%	19.50	891 / 901
pancreas	100%	1212.85	328 / 328	99%	18.69	176 / 178
adrenal gland	100%	1404.57	258 / 258	99%	21.35	227 / 230
stomach	100%	1219.90	359 / 359	98%	19.77	281 / 286
intestine	100%	1625.06	966 / 966	98%	20.07	517 / 527
liver	100%	998.59	226 / 226	96%	12.51	390 / 406
skin	100%	1790.58	1807 / 1809	94%	20.50	443 / 472
adipose	100%	1589.61	1204 / 1204	0%	0	0 / 0
blood vessel	100%	1912.65	1335 / 1335	0%	0	0 / 0
lymph node	0%	0	0 / 0	100%	14.07	29 / 29
muscle	100%	1133.51	803 / 803	0%	0	0 / 0
spleen	100%	1375.42	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	21.80	45 / 45
ureter	0%	0	0 / 0	100%	6.58	1 / 1
heart	98%	1521.15	846 / 861	0%	0	0 / 0
peripheral blood	83%	1053.36	771 / 929	0%	0	0 / 0
eye	0%	0	0 / 0	74%	7.96	59 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

III. Associated gene sets

GO_0006888	Biological process	endoplasmic reticulum to Golgi vesicle-mediated transport
GO_0006890	Biological process	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO_0005789	Cellular component	endoplasmic reticulum membrane
GO_0043231	Cellular component	intracellular membrane-bounded organelle
GO_0033116	Cellular component	endoplasmic reticulum-Golgi intermediate compartment membrane
GO_0005730	Cellular component	nucleolus
GO_0005783	Cellular component	endoplasmic reticulum
GO_0061852	Cellular component	retrograde transporter complex, Golgi to ER
GO_0005794	Cellular component	Golgi apparatus
GO_1990351	Cellular component	transporter complex
GO_0030134	Cellular component	COPII-coated ER to Golgi transport vesicle
GO_0016020	Cellular component	membrane
GO_0005737	Cellular component	cytoplasm
GO_0005634	Cellular component	nucleus
GO_0005515	Molecular function	protein binding

IV. Literature review

[source]

Gene name	ERGIC2
Protein name	ERGIC and golgi 2 Endoplasmic reticulum-Golgi intermediate compartment protein 2 Endoplasmic reticulum-Golgi intermediate compartment protein
Synonyms	ERV41 PTX1 CDA14
Description	FUNCTION: Possible role in transport between endoplasmic reticulum and Golgi. . FUNCTION: Plays a role in transport between endoplasmic reticulum and Golgi. . FUNCTION: Plays a role in transport between endoplasmic reticulum and Golgi. . FUNCTION: Plays a role in transport between endoplasmic reticulum and Golgi. . FUNCTION: Plays a role in transport between endoplasmic reticulum and Golgi. . FUNCTION: Plays a role in transport between endoplasmic reticulum and Golgi. . FUNCTION: Plays a role in transport between endoplasmic reticulum and Golgi. . FUNCTION: Plays a role in transport between endoplasmic reticulum and Golgi. .
Accessions	F8VUZ2 ENST00000546839.5 ENST00000552155.5 ENST00000548909.5 ENST00000546509.5 ENST00000360150.9 ENST00000552132.5 ENST00000551467.5 H0YHS0 H0YI50 Q96RQ1 ENST00000549182.1 ENST00000550353.5 F8VRW9 H0YI58 H0YHJ8 F8W0R1 ENST00000548441.1 F8VR88 F8VPA6

ERGIC2 report

I. Expression across cell types

II. Expression across tissues

III. Associated gene sets

IV. Literature review