Name | Number of supported studies | Average coverage | |
---|---|---|---|
non-classical monocyte | 17 studies | 29% ± 14% | |
endothelial cell | 15 studies | 29% ± 12% | |
macrophage | 13 studies | 24% ± 10% | |
fibroblast | 13 studies | 25% ± 12% | |
type I pneumocyte | 11 studies | 30% ± 8% | |
B cell | 11 studies | 26% ± 8% | |
CD16-negative, CD56-bright natural killer cell, human | 11 studies | 22% ± 6% | |
monocyte | 9 studies | 24% ± 6% | |
epithelial cell | 9 studies | 43% ± 21% | |
plasma cell | 8 studies | 25% ± 11% | |
classical monocyte | 8 studies | 24% ± 9% | |
goblet cell | 8 studies | 45% ± 16% | |
oligodendrocyte precursor cell | 8 studies | 32% ± 16% | |
memory B cell | 8 studies | 18% ± 4% | |
naive B cell | 8 studies | 19% ± 4% | |
microglial cell | 7 studies | 26% ± 10% | |
alveolar macrophage | 7 studies | 26% ± 12% | |
adipocyte | 7 studies | 24% ± 6% | |
astrocyte | 7 studies | 26% ± 9% | |
glutamatergic neuron | 6 studies | 40% ± 22% | |
precursor B cell | 6 studies | 44% ± 14% | |
myeloid cell | 6 studies | 26% ± 12% | |
ciliated cell | 6 studies | 26% ± 7% | |
club cell | 6 studies | 22% ± 4% | |
dendritic cell | 6 studies | 25% ± 12% | |
GABAergic neuron | 6 studies | 38% ± 19% | |
natural killer cell | 6 studies | 22% ± 2% | |
interneuron | 5 studies | 37% ± 20% | |
abnormal cell | 5 studies | 32% ± 15% | |
pro-B cell | 5 studies | 48% ± 10% | |
basal cell | 5 studies | 32% ± 12% | |
mononuclear phagocyte | 5 studies | 19% ± 3% | |
endothelial cell of lymphatic vessel | 5 studies | 22% ± 5% | |
type II pneumocyte | 5 studies | 25% ± 9% | |
plasmablast | 4 studies | 50% ± 19% | |
conventional dendritic cell | 4 studies | 22% ± 5% | |
neuron | 4 studies | 28% ± 10% | |
immature B cell | 4 studies | 30% ± 10% | |
mucus secreting cell | 4 studies | 25% ± 5% | |
hepatocyte | 4 studies | 54% ± 22% | |
luminal cell of prostate epithelium | 4 studies | 29% ± 8% | |
oligodendrocyte | 4 studies | 26% ± 5% | |
hematopoietic precursor cell | 3 studies | 33% ± 17% | |
CD16-positive, CD56-dim natural killer cell, human | 3 studies | 21% ± 4% | |
mature NK T cell | 3 studies | 21% ± 5% | |
granule cell | 3 studies | 24% ± 4% | |
lymphocyte | 3 studies | 27% ± 3% | |
pericyte | 3 studies | 25% ± 12% | |
innate lymphoid cell | 3 studies | 20% ± 1% | |
adventitial cell | 3 studies | 19% ± 2% | |
smooth muscle cell | 3 studies | 17% ± 2% | |
hematopoietic stem cell | 3 studies | 27% ± 12% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 14544.47 | 245 / 245 | 100% | 229.26 | 502 / 502 |
ovary | 100% | 8043.83 | 180 / 180 | 99% | 52.60 | 427 / 430 |
breast | 100% | 9263.69 | 459 / 459 | 99% | 93.31 | 1110 / 1118 |
intestine | 100% | 10539.46 | 966 / 966 | 99% | 53.95 | 522 / 527 |
thymus | 100% | 10786.04 | 653 / 653 | 99% | 56.24 | 599 / 605 |
lung | 100% | 12169.05 | 578 / 578 | 99% | 48.00 | 1143 / 1155 |
stomach | 100% | 11511.52 | 359 / 359 | 99% | 47.86 | 283 / 286 |
liver | 100% | 14657.07 | 226 / 226 | 99% | 48.41 | 400 / 406 |
pancreas | 99% | 6412.64 | 326 / 328 | 99% | 49.14 | 176 / 178 |
skin | 100% | 12440.56 | 1808 / 1809 | 98% | 41.44 | 464 / 472 |
kidney | 100% | 8487.58 | 89 / 89 | 98% | 76.46 | 882 / 901 |
esophagus | 100% | 8530.51 | 1445 / 1445 | 98% | 33.78 | 179 / 183 |
uterus | 100% | 9459.16 | 170 / 170 | 97% | 41.70 | 443 / 459 |
bladder | 100% | 8475.38 | 21 / 21 | 95% | 35.96 | 479 / 504 |
brain | 95% | 3892.42 | 2501 / 2642 | 100% | 37.19 | 704 / 705 |
adrenal gland | 100% | 20253.67 | 258 / 258 | 94% | 44.66 | 216 / 230 |
adipose | 100% | 9669.62 | 1204 / 1204 | 0% | 0 | 0 / 0 |
spleen | 100% | 10794.25 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 16.16 | 1 / 1 |
blood vessel | 100% | 10126.96 | 1334 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 6441.67 | 801 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 99% | 17825.31 | 923 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 30.73 | 79 / 80 |
tonsil | 0% | 0 | 0 / 0 | 98% | 32.85 | 44 / 45 |
lymph node | 0% | 0 | 0 / 0 | 97% | 30.52 | 28 / 29 |
heart | 96% | 5327.05 | 829 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006888 | Biological process | endoplasmic reticulum to Golgi vesicle-mediated transport |
GO_0006890 | Biological process | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum |
GO_0043231 | Cellular component | intracellular membrane-bounded organelle |
GO_0033116 | Cellular component | endoplasmic reticulum-Golgi intermediate compartment membrane |
GO_0000139 | Cellular component | Golgi membrane |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0005793 | Cellular component | endoplasmic reticulum-Golgi intermediate compartment |
GO_0030134 | Cellular component | COPII-coated ER to Golgi transport vesicle |
GO_0016020 | Cellular component | membrane |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0005515 | Molecular function | protein binding |
Gene name | ERGIC1 |
Protein name | Endoplasmic reticulum-Golgi intermediate compartment protein 1 (ER-Golgi intermediate compartment 32 kDa protein) (ERGIC-32) Endoplasmic reticulum-Golgi intermediate compartment protein Endoplasmic reticulum-golgi intermediate compartment 1 |
Synonyms | KIAA1181 ERGIC32 HT034 |
Description | FUNCTION: Possible role in transport between endoplasmic reticulum and Golgi. . FUNCTION: Plays a role in transport between endoplasmic reticulum and Golgi. . FUNCTION: Plays a role in transport between endoplasmic reticulum and Golgi. . FUNCTION: Plays a role in transport between endoplasmic reticulum and Golgi. . FUNCTION: Plays a role in transport between endoplasmic reticulum and Golgi. . FUNCTION: Plays a role in transport between endoplasmic reticulum and Golgi. . FUNCTION: Plays a role in transport between endoplasmic reticulum and Golgi. . FUNCTION: Plays a role in transport between endoplasmic reticulum and Golgi. . |
Accessions | F2Z2P5 A0A8I5KS17 ENST00000519796.5 ENST00000685391.1 A0A8I5KSL7 A0A8I5KXB6 A0A8I5KWW8 ENST00000693572.1 ENST00000691612.1 ENST00000689975.1 A0A8J8YV97 ENST00000686615.1 ENST00000684928.1 ENST00000690799.1 ENST00000687901.1 [Q969X5-2] H0YAV2 Q969X5 ENST00000393784.8 [Q969X5-1] ENST00000693299.1 [Q969X5-2] ENST00000520642.5 ENST00000686955.1 ENST00000687702.1 A0A8I5KPY8 ENST00000326654.7 A0A8I5KYT1 A0A8I5KUV7 |