Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 14 studies | 38% ± 21% | |
type I pneumocyte | 12 studies | 34% ± 12% | |
basal cell | 12 studies | 35% ± 17% | |
ciliated cell | 10 studies | 33% ± 16% | |
mesothelial cell | 10 studies | 39% ± 15% | |
oligodendrocyte | 10 studies | 30% ± 9% | |
glutamatergic neuron | 9 studies | 43% ± 24% | |
oligodendrocyte precursor cell | 9 studies | 30% ± 11% | |
secretory cell | 8 studies | 26% ± 8% | |
type II pneumocyte | 7 studies | 22% ± 7% | |
enterocyte | 6 studies | 27% ± 3% | |
goblet cell | 6 studies | 30% ± 13% | |
endothelial cell | 6 studies | 31% ± 18% | |
interneuron | 6 studies | 35% ± 15% | |
club cell | 6 studies | 33% ± 9% | |
GABAergic neuron | 6 studies | 41% ± 17% | |
microglial cell | 5 studies | 23% ± 6% | |
neuron | 5 studies | 41% ± 17% | |
hepatocyte | 5 studies | 50% ± 26% | |
keratinocyte | 5 studies | 32% ± 16% | |
luminal cell of prostate epithelium | 4 studies | 26% ± 5% | |
respiratory goblet cell | 3 studies | 23% ± 9% | |
progenitor cell | 3 studies | 29% ± 1% | |
astrocyte | 3 studies | 26% ± 4% | |
pancreatic ductal cell | 3 studies | 63% ± 16% | |
abnormal cell | 3 studies | 33% ± 18% | |
brush cell | 3 studies | 23% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
liver | 100% | 1915.30 | 226 / 226 | 96% | 31.55 | 389 / 406 |
pancreas | 99% | 1248.07 | 325 / 328 | 91% | 29.47 | 162 / 178 |
thymus | 99% | 1543.67 | 648 / 653 | 90% | 37.44 | 545 / 605 |
prostate | 89% | 2291.56 | 218 / 245 | 100% | 64.71 | 502 / 502 |
lung | 80% | 891.13 | 463 / 578 | 97% | 44.85 | 1116 / 1155 |
brain | 87% | 1005.26 | 2287 / 2642 | 84% | 18.16 | 592 / 705 |
stomach | 75% | 2131.89 | 269 / 359 | 95% | 48.23 | 273 / 286 |
kidney | 96% | 927.01 | 85 / 89 | 66% | 17.55 | 599 / 901 |
uterus | 59% | 486.64 | 100 / 170 | 91% | 51.27 | 417 / 459 |
bladder | 52% | 1863.57 | 11 / 21 | 95% | 61.47 | 480 / 504 |
intestine | 46% | 1193.17 | 444 / 966 | 97% | 45.94 | 510 / 527 |
esophagus | 39% | 1156.93 | 559 / 1445 | 98% | 53.70 | 180 / 183 |
breast | 50% | 495.88 | 231 / 459 | 75% | 23.03 | 833 / 1118 |
ovary | 4% | 24.23 | 8 / 180 | 97% | 37.16 | 418 / 430 |
tonsil | 0% | 0 | 0 / 0 | 100% | 56.33 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 27.14 | 1 / 1 |
skin | 72% | 4121.15 | 1305 / 1809 | 18% | 3.86 | 86 / 472 |
adrenal gland | 79% | 565.86 | 205 / 258 | 10% | 1.51 | 23 / 230 |
heart | 83% | 895.84 | 713 / 861 | 0% | 0 | 0 / 0 |
adipose | 30% | 382.23 | 357 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 6% | 0.64 | 5 / 80 |
spleen | 4% | 18.76 | 10 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 1% | 9.76 | 16 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0.76 | 2 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
muscle | 0% | 0 | 0 / 803 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0086067 | Biological process | AV node cell to bundle of His cell communication |
GO_0010669 | Biological process | epithelial structure maintenance |
GO_0007507 | Biological process | heart development |
GO_0070633 | Biological process | transepithelial transport |
GO_0055013 | Biological process | cardiac muscle cell development |
GO_0046629 | Biological process | gamma-delta T cell activation |
GO_0098904 | Biological process | regulation of AV node cell action potential |
GO_0030593 | Biological process | neutrophil chemotaxis |
GO_0045216 | Biological process | cell-cell junction organization |
GO_0034109 | Biological process | homotypic cell-cell adhesion |
GO_0030036 | Biological process | actin cytoskeleton organization |
GO_0046718 | Biological process | symbiont entry into host cell |
GO_0086072 | Biological process | AV node cell-bundle of His cell adhesion involved in cell communication |
GO_0007005 | Biological process | mitochondrion organization |
GO_0008354 | Biological process | germ cell migration |
GO_0007157 | Biological process | heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules |
GO_0001669 | Cellular component | acrosomal vesicle |
GO_0005576 | Cellular component | extracellular region |
GO_0005886 | Cellular component | plasma membrane |
GO_0045121 | Cellular component | membrane raft |
GO_0032991 | Cellular component | protein-containing complex |
GO_0005654 | Cellular component | nucleoplasm |
GO_0043005 | Cellular component | neuron projection |
GO_0005911 | Cellular component | cell-cell junction |
GO_0030175 | Cellular component | filopodium |
GO_0005912 | Cellular component | adherens junction |
GO_0030426 | Cellular component | growth cone |
GO_0005737 | Cellular component | cytoplasm |
GO_0005923 | Cellular component | bicellular tight junction |
GO_0044297 | Cellular component | cell body |
GO_0030054 | Cellular component | cell junction |
GO_0016327 | Cellular component | apicolateral plasma membrane |
GO_0014704 | Cellular component | intercalated disc |
GO_0016323 | Cellular component | basolateral plasma membrane |
GO_0071253 | Molecular function | connexin binding |
GO_0008013 | Molecular function | beta-catenin binding |
GO_0001618 | Molecular function | virus receptor activity |
GO_0005178 | Molecular function | integrin binding |
GO_0030165 | Molecular function | PDZ domain binding |
GO_0050839 | Molecular function | cell adhesion molecule binding |
GO_0005515 | Molecular function | protein binding |
GO_0086082 | Molecular function | cell adhesive protein binding involved in AV node cell-bundle of His cell communication |
Gene name | CXADR |
Protein name | Coxsackievirus and adenovirus receptor (CAR) (hCAR) (CVB3-binding protein) (Coxsackievirus B-adenovirus receptor) (HCVADR) |
Synonyms | CAR |
Description | FUNCTION: Component of the epithelial apical junction complex that may function as a homophilic cell adhesion molecule and is essential for tight junction integrity. Also involved in transepithelial migration of leukocytes through adhesive interactions with JAML a transmembrane protein of the plasma membrane of leukocytes. The interaction between both receptors also mediates the activation of gamma-delta T-cells, a subpopulation of T-cells residing in epithelia and involved in tissue homeostasis and repair. Upon epithelial CXADR-binding, JAML induces downstream cell signaling events in gamma-delta T-cells through PI3-kinase and MAP kinases. It results in proliferation and production of cytokines and growth factors by T-cells that in turn stimulate epithelial tissues repair. .; FUNCTION: (Microbial infection) Acts as a receptor for adenovirus type C. .; FUNCTION: (Microbial infection) Acts as a receptor for Coxsackievirus B1 to B6. . |
Accessions | ENST00000356275.10 [P78310-3] ENST00000400165.5 [P78310-4] ENST00000284878.12 [P78310-1] ENST00000400166.5 [P78310-5] ENST00000400169.1 [P78310-6] P78310 |