Name | Number of supported studies | Average coverage | |
---|---|---|---|
B cell | 41 studies | 49% ± 19% | |
macrophage | 37 studies | 43% ± 17% | |
conventional dendritic cell | 27 studies | 48% ± 16% | |
dendritic cell | 25 studies | 60% ± 25% | |
non-classical monocyte | 23 studies | 46% ± 18% | |
classical monocyte | 22 studies | 35% ± 14% | |
monocyte | 20 studies | 42% ± 18% | |
naive B cell | 20 studies | 57% ± 20% | |
memory B cell | 19 studies | 56% ± 20% | |
mast cell | 18 studies | 37% ± 16% | |
plasmacytoid dendritic cell | 14 studies | 34% ± 18% | |
myeloid cell | 11 studies | 52% ± 19% | |
alveolar macrophage | 8 studies | 35% ± 9% | |
neutrophil | 8 studies | 32% ± 18% | |
microglial cell | 8 studies | 42% ± 25% | |
natural killer cell | 7 studies | 23% ± 5% | |
leukocyte | 7 studies | 41% ± 13% | |
mononuclear phagocyte | 6 studies | 50% ± 23% | |
immature B cell | 6 studies | 47% ± 13% | |
monocyte-derived dendritic cell | 5 studies | 74% ± 17% | |
endothelial cell | 5 studies | 32% ± 13% | |
precursor B cell | 5 studies | 37% ± 24% | |
innate lymphoid cell | 5 studies | 34% ± 12% | |
mucosal invariant T cell | 4 studies | 24% ± 5% | |
CD16-negative, CD56-bright natural killer cell, human | 4 studies | 26% ± 10% | |
germinal center B cell | 4 studies | 42% ± 17% | |
intermediate monocyte | 4 studies | 40% ± 16% | |
plasmablast | 3 studies | 19% ± 2% | |
gamma-delta T cell | 3 studies | 23% ± 5% | |
regulatory T cell | 3 studies | 20% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
lung | 100% | 2787.33 | 578 / 578 | 97% | 35.07 | 1121 / 1155 |
brain | 97% | 1402.91 | 2573 / 2642 | 98% | 34.91 | 689 / 705 |
ovary | 97% | 1757.96 | 174 / 180 | 96% | 19.17 | 412 / 430 |
prostate | 96% | 907.92 | 236 / 245 | 96% | 16.86 | 482 / 502 |
kidney | 97% | 1042.84 | 86 / 89 | 93% | 24.99 | 837 / 901 |
adrenal gland | 100% | 1675.29 | 258 / 258 | 86% | 40.37 | 197 / 230 |
thymus | 82% | 469.72 | 537 / 653 | 99% | 36.95 | 601 / 605 |
breast | 81% | 559.95 | 372 / 459 | 98% | 32.13 | 1100 / 1118 |
uterus | 82% | 724.98 | 139 / 170 | 95% | 27.52 | 434 / 459 |
skin | 74% | 364.96 | 1334 / 1809 | 99% | 48.75 | 466 / 472 |
intestine | 62% | 488.36 | 600 / 966 | 88% | 17.17 | 463 / 527 |
bladder | 43% | 297.71 | 9 / 21 | 92% | 27.95 | 462 / 504 |
esophagus | 46% | 194.84 | 667 / 1445 | 84% | 16.10 | 153 / 183 |
stomach | 40% | 199.26 | 145 / 359 | 88% | 16.69 | 253 / 286 |
pancreas | 16% | 52.16 | 51 / 328 | 92% | 22.10 | 164 / 178 |
lymph node | 0% | 0 | 0 / 0 | 100% | 518.60 | 29 / 29 |
spleen | 100% | 1907.48 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 44.48 | 45 / 45 |
eye | 0% | 0 | 0 / 0 | 98% | 20.95 | 78 / 80 |
adipose | 91% | 845.38 | 1095 / 1204 | 0% | 0 | 0 / 0 |
liver | 23% | 88.40 | 52 / 226 | 49% | 6.50 | 199 / 406 |
peripheral blood | 65% | 2022.51 | 603 / 929 | 0% | 0 | 0 / 0 |
blood vessel | 53% | 370.69 | 702 / 1335 | 0% | 0 | 0 / 0 |
heart | 51% | 243.87 | 438 / 861 | 0% | 0 | 0 / 0 |
muscle | 7% | 19.13 | 55 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0032713 | Biological process | negative regulation of interleukin-4 production |
GO_0007165 | Biological process | signal transduction |
GO_0014070 | Biological process | response to organic cyclic compound |
GO_0043372 | Biological process | positive regulation of CD4-positive, alpha-beta T cell differentiation |
GO_0032733 | Biological process | positive regulation of interleukin-10 production |
GO_0006959 | Biological process | humoral immune response |
GO_0043367 | Biological process | CD4-positive, alpha-beta T cell differentiation |
GO_0032743 | Biological process | positive regulation of interleukin-2 production |
GO_0006952 | Biological process | defense response |
GO_0009897 | Cellular component | external side of plasma membrane |
GO_0005886 | Cellular component | plasma membrane |
GO_0005515 | Molecular function | protein binding |
Gene name | CD83 |
Protein name | CD83 molecule CD83 antigen (hCD83) (B-cell activation protein) (Cell surface protein HB15) (CD antigen CD83) |
Synonyms | |
Description | FUNCTION: May play a significant role in antigen presentation or the cellular interactions that follow lymphocyte activation. |
Accessions | ENST00000612003.4 A0A087WX61 ENST00000379153.4 Q01151 |