Name | Number of supported studies | Average coverage | |
---|---|---|---|
lung | 10 studies | 27% ± 11% | |
brain | 10 studies | 33% ± 15% | |
peripheral blood | 8 studies | 32% ± 14% | |
liver | 5 studies | 27% ± 11% | |
eye | 4 studies | 32% ± 6% | |
intestine | 4 studies | 22% ± 8% | |
pancreas | 3 studies | 39% ± 15% | |
kidney | 3 studies | 19% ± 1% | |
placenta | 3 studies | 21% ± 1% | |
uterus | 3 studies | 30% ± 10% | |
adipose | 3 studies | 17% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 8090.79 | 459 / 459 | 100% | 277.16 | 1118 / 1118 |
prostate | 100% | 8265.40 | 245 / 245 | 100% | 231.26 | 502 / 502 |
brain | 100% | 8308.47 | 2641 / 2642 | 100% | 302.03 | 705 / 705 |
lung | 100% | 9228.83 | 578 / 578 | 100% | 183.72 | 1153 / 1155 |
thymus | 100% | 8103.45 | 653 / 653 | 100% | 235.74 | 602 / 605 |
esophagus | 100% | 6126.28 | 1445 / 1445 | 99% | 127.88 | 182 / 183 |
uterus | 100% | 7301.21 | 170 / 170 | 99% | 200.22 | 456 / 459 |
ovary | 100% | 8406.84 | 180 / 180 | 99% | 139.10 | 427 / 430 |
kidney | 100% | 6940.97 | 89 / 89 | 99% | 167.13 | 894 / 901 |
bladder | 100% | 6428.19 | 21 / 21 | 99% | 186.38 | 500 / 504 |
pancreas | 100% | 7454.57 | 327 / 328 | 99% | 144.97 | 177 / 178 |
adrenal gland | 100% | 8815.05 | 258 / 258 | 99% | 132.00 | 227 / 230 |
liver | 100% | 5139.94 | 226 / 226 | 99% | 143.24 | 400 / 406 |
skin | 100% | 8977.64 | 1809 / 1809 | 98% | 226.57 | 463 / 472 |
stomach | 100% | 6736.41 | 359 / 359 | 98% | 116.08 | 280 / 286 |
intestine | 100% | 6672.95 | 966 / 966 | 98% | 138.14 | 514 / 527 |
adipose | 100% | 8350.60 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 225.94 | 29 / 29 |
spleen | 100% | 14311.72 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 177.33 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 119.20 | 1 / 1 |
muscle | 100% | 4674.54 | 800 / 803 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 5117.86 | 1330 / 1335 | 0% | 0 | 0 / 0 |
heart | 98% | 4421.89 | 844 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 97% | 9358.10 | 902 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 93% | 136.47 | 74 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0008150 | Biological process | biological_process |
GO_0003674 | Molecular function | molecular_function |
Gene name | C6orf62 |
Protein name | Uncharacterized protein C6orf62 (HBV X-transactivated gene 12 protein) (HBV XAg-transactivated protein 12) |
Synonyms | XTP12 Nbla00237 |
Description | |
Accessions | Q9GZU0 ENST00000378119.9 [Q9GZU0-1] ENST00000710317.1 [Q9GZU0-1] ENST00000378102.3 [Q9GZU0-2] |