Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 17 studies | 42% ± 20% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 99% | 500.74 | 2608 / 2642 | 96% | 4.25 | 680 / 705 |
pancreas | 92% | 305.61 | 303 / 328 | 72% | 2.21 | 129 / 178 |
thymus | 94% | 316.33 | 616 / 653 | 70% | 2.50 | 425 / 605 |
lung | 100% | 998.80 | 576 / 578 | 64% | 2.08 | 744 / 1155 |
breast | 99% | 696.73 | 456 / 459 | 65% | 1.89 | 723 / 1118 |
uterus | 99% | 1050.26 | 168 / 170 | 53% | 1.88 | 244 / 459 |
esophagus | 91% | 366.09 | 1314 / 1445 | 61% | 2.16 | 111 / 183 |
prostate | 100% | 649.83 | 244 / 245 | 50% | 0.90 | 249 / 502 |
skin | 73% | 623.47 | 1323 / 1809 | 66% | 2.53 | 312 / 472 |
ovary | 99% | 850.84 | 178 / 180 | 37% | 0.92 | 161 / 430 |
liver | 93% | 569.00 | 211 / 226 | 30% | 0.59 | 121 / 406 |
bladder | 95% | 312.62 | 20 / 21 | 24% | 0.66 | 119 / 504 |
intestine | 92% | 533.17 | 890 / 966 | 20% | 0.67 | 106 / 527 |
stomach | 76% | 198.14 | 272 / 359 | 30% | 0.79 | 87 / 286 |
spleen | 100% | 1292.40 | 241 / 241 | 0% | 0 | 0 / 0 |
muscle | 99% | 792.98 | 793 / 803 | 0% | 0 | 0 / 0 |
adipose | 98% | 457.85 | 1185 / 1204 | 0% | 0 | 0 / 0 |
kidney | 80% | 219.89 | 71 / 89 | 18% | 0.40 | 165 / 901 |
lymph node | 0% | 0 | 0 / 0 | 93% | 18.39 | 27 / 29 |
blood vessel | 93% | 373.33 | 1242 / 1335 | 0% | 0 | 0 / 0 |
heart | 86% | 237.41 | 743 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 73% | 2.12 | 33 / 45 |
peripheral blood | 63% | 283.28 | 589 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 46% | 1.07 | 37 / 80 |
adrenal gland | 14% | 66.07 | 36 / 258 | 11% | 0.27 | 25 / 230 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0000122 | Biological process | negative regulation of transcription by RNA polymerase II |
GO_0051170 | Biological process | import into nucleus |
GO_0090721 | Biological process | primary adaptive immune response involving T cells and B cells |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0090575 | Cellular component | RNA polymerase II transcription regulator complex |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0000785 | Cellular component | chromatin |
GO_0005634 | Cellular component | nucleus |
GO_1990837 | Molecular function | sequence-specific double-stranded DNA binding |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0005515 | Molecular function | protein binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0001227 | Molecular function | DNA-binding transcription repressor activity, RNA polymerase II-specific |
Gene name | BACH2 |
Protein name | Transcription regulator protein BACH2 Transcription regulator protein BACH2 (BTB and CNC homolog 2) |
Synonyms | |
Description | FUNCTION: Transcriptional regulator that acts as a repressor or activator (By similarity). Binds to Maf recognition elements (MARE) (By similarity). Plays an important role in coordinating transcription activation and repression by MAFK (By similarity). Induces apoptosis in response to oxidative stress through repression of the antiapoptotic factor HMOX1 . Positively regulates the nuclear import of actin (By similarity). Is a key regulator of adaptive immunity, crucial for the maintenance of regulatory T-cell function and B-cell maturation . . |
Accessions | ENST00000453877.6 ENST00000343122.7 ENST00000695952.1 ENST00000453877.5 Q7Z6Q0 ENST00000406998.6 ENST00000257749.9 Q9BYV9 ENST00000406998.7 |