Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 5243.11 | 459 / 459 | 97% | 41.43 | 1086 / 1118 |
brain | 95% | 2860.70 | 2504 / 2642 | 100% | 124.84 | 705 / 705 |
adrenal gland | 100% | 3292.08 | 258 / 258 | 94% | 21.16 | 217 / 230 |
kidney | 94% | 1425.93 | 84 / 89 | 89% | 23.98 | 803 / 901 |
lung | 100% | 4456.38 | 577 / 578 | 79% | 12.88 | 907 / 1155 |
skin | 94% | 1586.29 | 1692 / 1809 | 77% | 22.93 | 364 / 472 |
prostate | 98% | 1898.69 | 240 / 245 | 63% | 7.08 | 316 / 502 |
bladder | 100% | 2250.19 | 21 / 21 | 61% | 9.63 | 305 / 504 |
thymus | 96% | 1483.73 | 629 / 653 | 62% | 11.34 | 374 / 605 |
uterus | 99% | 2872.39 | 168 / 170 | 54% | 7.67 | 249 / 459 |
stomach | 94% | 1455.89 | 337 / 359 | 58% | 8.76 | 166 / 286 |
intestine | 99% | 2975.09 | 959 / 966 | 44% | 5.90 | 231 / 527 |
esophagus | 86% | 1693.26 | 1244 / 1445 | 50% | 6.28 | 92 / 183 |
ovary | 100% | 2753.08 | 180 / 180 | 35% | 3.40 | 149 / 430 |
adipose | 100% | 5578.40 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 3446.47 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 39.90 | 29 / 29 |
muscle | 100% | 4785.13 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 6435.06 | 241 / 241 | 0% | 0 | 0 / 0 |
pancreas | 20% | 163.62 | 65 / 328 | 79% | 12.87 | 141 / 178 |
heart | 99% | 3705.44 | 851 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 98% | 3905.21 | 913 / 929 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 71% | 11.81 | 32 / 45 |
liver | 29% | 235.70 | 66 / 226 | 27% | 2.99 | 111 / 406 |
eye | 0% | 0 | 0 / 0 | 34% | 2.89 | 27 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0006915 | Biological process | apoptotic process |
GO_0007254 | Biological process | JNK cascade |
GO_0030032 | Biological process | lamellipodium assembly |
GO_0005911 | Cellular component | cell-cell junction |
GO_0005829 | Cellular component | cytosol |
GO_0030027 | Cellular component | lamellipodium |
GO_0005737 | Cellular component | cytoplasm |
GO_0005085 | Molecular function | guanyl-nucleotide exchange factor activity |
GO_0005515 | Molecular function | protein binding |
GO_0005096 | Molecular function | GTPase activator activity |
Gene name | ARHGEF6 |
Protein name | Rho guanine nucleotide exchange factor 6 (Alpha-Pix) (COOL-2) (PAK-interacting exchange factor alpha) (Rac/Cdc42 guanine nucleotide exchange factor 6) ARHGEF6 |
Synonyms | COOL2 KIAA0006 PIXA |
Description | FUNCTION: Acts as a RAC1 guanine nucleotide exchange factor (GEF). |
Accessions | A0A2X0SSH0 ENST00000370622.5 [Q15052-2] Q15052 ENST00000370620.5 [Q15052-2] ENST00000250617.7 [Q15052-1] |