Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 15 studies | 26% ± 11% | |
oligodendrocyte | 11 studies | 28% ± 10% | |
oligodendrocyte precursor cell | 9 studies | 26% ± 13% | |
astrocyte | 9 studies | 28% ± 12% | |
type I pneumocyte | 7 studies | 25% ± 8% | |
microglial cell | 7 studies | 25% ± 7% | |
epithelial cell | 7 studies | 37% ± 20% | |
ciliated cell | 7 studies | 27% ± 10% | |
GABAergic neuron | 7 studies | 37% ± 20% | |
glutamatergic neuron | 6 studies | 45% ± 25% | |
interneuron | 6 studies | 35% ± 21% | |
adipocyte | 6 studies | 22% ± 3% | |
fibroblast | 6 studies | 24% ± 9% | |
type II pneumocyte | 6 studies | 20% ± 5% | |
macrophage | 6 studies | 28% ± 9% | |
natural killer cell | 5 studies | 17% ± 1% | |
classical monocyte | 5 studies | 19% ± 4% | |
neuron | 5 studies | 27% ± 12% | |
retinal rod cell | 5 studies | 22% ± 5% | |
goblet cell | 5 studies | 31% ± 27% | |
club cell | 5 studies | 21% ± 6% | |
B cell | 4 studies | 18% ± 1% | |
myeloid cell | 4 studies | 21% ± 2% | |
lymphocyte | 4 studies | 25% ± 7% | |
basal cell | 4 studies | 34% ± 17% | |
monocyte | 4 studies | 21% ± 2% | |
T cell | 4 studies | 17% ± 1% | |
endothelial cell of lymphatic vessel | 4 studies | 27% ± 9% | |
pericyte | 4 studies | 23% ± 10% | |
smooth muscle cell | 4 studies | 19% ± 1% | |
CD16-negative, CD56-bright natural killer cell, human | 3 studies | 17% ± 1% | |
CD16-positive, CD56-dim natural killer cell, human | 3 studies | 17% ± 2% | |
hematopoietic precursor cell | 3 studies | 20% ± 4% | |
granule cell | 3 studies | 18% ± 4% | |
retinal ganglion cell | 3 studies | 21% ± 3% | |
plasma cell | 3 studies | 25% ± 6% | |
squamous epithelial cell | 3 studies | 37% ± 23% | |
retinal cone cell | 3 studies | 23% ± 5% | |
respiratory goblet cell | 3 studies | 23% ± 7% | |
hepatocyte | 3 studies | 33% ± 18% | |
dendritic cell | 3 studies | 24% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 5748.61 | 1445 / 1445 | 100% | 40.75 | 183 / 183 |
prostate | 100% | 5658.04 | 245 / 245 | 100% | 36.18 | 502 / 502 |
lung | 100% | 6891.91 | 578 / 578 | 100% | 33.90 | 1154 / 1155 |
breast | 100% | 6413.09 | 459 / 459 | 100% | 43.37 | 1117 / 1118 |
bladder | 100% | 4859.05 | 21 / 21 | 100% | 29.39 | 503 / 504 |
kidney | 100% | 6287.87 | 89 / 89 | 100% | 37.14 | 897 / 901 |
thymus | 100% | 6763.45 | 653 / 653 | 100% | 31.71 | 602 / 605 |
pancreas | 100% | 4151.98 | 328 / 328 | 99% | 29.41 | 177 / 178 |
brain | 99% | 4559.89 | 2627 / 2642 | 100% | 34.24 | 705 / 705 |
intestine | 100% | 5739.72 | 966 / 966 | 99% | 29.91 | 523 / 527 |
stomach | 100% | 5688.12 | 359 / 359 | 99% | 29.97 | 283 / 286 |
uterus | 100% | 5108.12 | 170 / 170 | 98% | 28.40 | 451 / 459 |
skin | 100% | 7547.76 | 1809 / 1809 | 98% | 30.59 | 461 / 472 |
adrenal gland | 100% | 7918.17 | 258 / 258 | 97% | 22.98 | 224 / 230 |
ovary | 100% | 4534.41 | 180 / 180 | 97% | 19.04 | 416 / 430 |
liver | 100% | 4743.35 | 226 / 226 | 96% | 17.18 | 390 / 406 |
adipose | 100% | 5752.12 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 4832.53 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 29.50 | 29 / 29 |
muscle | 100% | 5172.46 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 6897.90 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 28.90 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 10.34 | 1 / 1 |
peripheral blood | 98% | 5355.09 | 908 / 929 | 0% | 0 | 0 / 0 |
heart | 97% | 2756.49 | 833 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 93% | 18.96 | 74 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0035646 | Biological process | endosome to melanosome transport |
GO_0016182 | Biological process | synaptic vesicle budding from endosome |
GO_0045954 | Biological process | positive regulation of natural killer cell mediated cytotoxicity |
GO_0043323 | Biological process | positive regulation of natural killer cell degranulation |
GO_0048488 | Biological process | synaptic vesicle endocytosis |
GO_0006886 | Biological process | intracellular protein transport |
GO_0032438 | Biological process | melanosome organization |
GO_0016192 | Biological process | vesicle-mediated transport |
GO_0060155 | Biological process | platelet dense granule organization |
GO_0090160 | Biological process | Golgi to lysosome transport |
GO_0110010 | Biological process | basolateral protein secretion |
GO_0006896 | Biological process | Golgi to vacuole transport |
GO_1903232 | Biological process | melanosome assembly |
GO_0098793 | Cellular component | presynapse |
GO_0048471 | Cellular component | perinuclear region of cytoplasm |
GO_0016020 | Cellular component | membrane |
GO_0055037 | Cellular component | recycling endosome |
GO_0005769 | Cellular component | early endosome |
GO_0030121 | Cellular component | AP-1 adaptor complex |
GO_0030136 | Cellular component | clathrin-coated vesicle |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0032588 | Cellular component | trans-Golgi network membrane |
GO_0000139 | Cellular component | Golgi membrane |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0043231 | Cellular component | intracellular membrane-bounded organelle |
GO_0005905 | Cellular component | clathrin-coated pit |
GO_0030665 | Cellular component | clathrin-coated vesicle membrane |
GO_0030659 | Cellular component | cytoplasmic vesicle membrane |
GO_0005765 | Cellular component | lysosomal membrane |
GO_0030742 | Molecular function | GTP-dependent protein binding |
GO_0031267 | Molecular function | small GTPase binding |
GO_0035615 | Molecular function | clathrin adaptor activity |
GO_0005518 | Molecular function | collagen binding |
GO_0005515 | Molecular function | protein binding |
GO_0019894 | Molecular function | kinesin binding |
Gene name | AP1G1 |
Protein name | Adaptor related protein complex 1 subunit gamma 1 AP1G1 protein Adaptor related protein complex 1 subunit gamma 1 (cDNA FLJ30560 fis, clone BRAWH2004217, highly similar to AP-1 complex subunit gamma-1) AP-1 complex subunit gamma-1 (Adaptor protein complex AP-1 subunit gamma-1) (Adaptor-related protein complex 1 subunit gamma-1) (Clathrin assembly protein complex 1 gamma-1 large chain) (Gamma1-adaptin) (Golgi adaptor HA1/AP1 adaptin subunit gamma-1) AP-1 complex subunit gamma |
Synonyms | ADTG CLAPG1 |
Description | FUNCTION: Subunit of clathrin-associated adaptor protein complex 1 that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules. In association with AFTPH/aftiphilin in the aftiphilin/p200/gamma-synergin complex, involved in the trafficking of transferrin from early to recycling endosomes, and the membrane trafficking of furin and the lysosomal enzyme cathepsin D between the trans-Golgi network (TGN) and endosomes . . |
Accessions | H3BNN2 ENST00000565412.5 ENST00000299980.9 [O43747-1] ENST00000569748.5 [O43747-1] O43747 H3BS13 H3BN75 H3BPN9 ENST00000568327.5 ENST00000566179.1 H3BR36 ENST00000565009.5 ENST00000393512.7 [O43747-2] ENST00000570017.1 ENST00000450149.6 H3BV30 H3BRM7 ENST00000569975.5 Q8IY97 H3BN71 B3KNW1 ENST00000563104.5 Q9BTR5 ENST00000564155.5 H3BUN9 B4DGE1 H3BNR4 ENST00000569185.5 ENST00000563259.5 ENST00000567583.1 |