Name | Number of supported studies | Average coverage | |
---|---|---|---|
fibroblast | 41 studies | 43% ± 20% | |
endothelial cell | 38 studies | 38% ± 17% | |
smooth muscle cell | 31 studies | 47% ± 21% | |
pericyte | 29 studies | 39% ± 18% | |
endothelial cell of lymphatic vessel | 27 studies | 64% ± 19% | |
astrocyte | 16 studies | 39% ± 18% | |
connective tissue cell | 15 studies | 40% ± 20% | |
capillary endothelial cell | 13 studies | 31% ± 9% | |
oligodendrocyte precursor cell | 13 studies | 31% ± 13% | |
myofibroblast cell | 12 studies | 40% ± 19% | |
glutamatergic neuron | 11 studies | 38% ± 21% | |
adipocyte | 11 studies | 47% ± 13% | |
endothelial cell of vascular tree | 11 studies | 33% ± 12% | |
neuron | 10 studies | 42% ± 22% | |
vein endothelial cell | 9 studies | 28% ± 9% | |
mesothelial cell | 8 studies | 48% ± 17% | |
endothelial cell of artery | 7 studies | 25% ± 10% | |
GABAergic neuron | 7 studies | 33% ± 14% | |
retinal ganglion cell | 7 studies | 75% ± 25% | |
Mueller cell | 6 studies | 67% ± 23% | |
precursor B cell | 5 studies | 35% ± 15% | |
pro-B cell | 5 studies | 60% ± 20% | |
adventitial cell | 5 studies | 47% ± 12% | |
endothelial cell of sinusoid | 4 studies | 48% ± 24% | |
glomerular endothelial cell | 4 studies | 47% ± 10% | |
abnormal cell | 4 studies | 27% ± 10% | |
glial cell | 4 studies | 28% ± 14% | |
interneuron | 4 studies | 39% ± 22% | |
secretory cell | 4 studies | 25% ± 6% | |
progenitor cell | 3 studies | 37% ± 23% | |
B cell | 3 studies | 33% ± 9% | |
neural crest cell | 3 studies | 45% ± 2% | |
granule cell | 3 studies | 37% ± 14% | |
microglial cell | 3 studies | 47% ± 24% | |
retinal pigment epithelial cell | 3 studies | 29% ± 8% | |
neural progenitor cell | 3 studies | 35% ± 15% | |
Schwann cell | 3 studies | 42% ± 13% | |
melanocyte | 3 studies | 41% ± 19% | |
mast cell | 3 studies | 19% ± 4% | |
parietal epithelial cell | 3 studies | 43% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 90% | 10404.04 | 2372 / 2642 | 95% | 44.93 | 671 / 705 |
kidney | 91% | 12046.01 | 81 / 89 | 86% | 76.58 | 775 / 901 |
prostate | 94% | 9895.92 | 231 / 245 | 83% | 22.34 | 415 / 502 |
thymus | 97% | 9369.33 | 632 / 653 | 74% | 21.82 | 449 / 605 |
ovary | 100% | 33820.48 | 180 / 180 | 69% | 19.72 | 295 / 430 |
breast | 99% | 22506.15 | 456 / 459 | 61% | 13.47 | 682 / 1118 |
lung | 100% | 16882.53 | 576 / 578 | 54% | 18.16 | 625 / 1155 |
bladder | 100% | 11535.86 | 21 / 21 | 48% | 12.47 | 243 / 504 |
skin | 60% | 7835.16 | 1083 / 1809 | 86% | 74.08 | 407 / 472 |
uterus | 99% | 11838.24 | 168 / 170 | 42% | 17.86 | 191 / 459 |
esophagus | 74% | 7554.59 | 1066 / 1445 | 55% | 15.83 | 100 / 183 |
intestine | 87% | 17577.85 | 845 / 966 | 41% | 12.25 | 215 / 527 |
adrenal gland | 53% | 3640.10 | 137 / 258 | 50% | 18.44 | 115 / 230 |
stomach | 52% | 8218.37 | 187 / 359 | 50% | 14.73 | 144 / 286 |
adipose | 100% | 31086.82 | 1204 / 1204 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 12.12 | 1 / 1 |
blood vessel | 100% | 19480.22 | 1334 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 95% | 56.23 | 76 / 80 |
pancreas | 6% | 318.33 | 20 / 328 | 88% | 40.57 | 156 / 178 |
spleen | 77% | 5486.59 | 185 / 241 | 0% | 0 | 0 / 0 |
heart | 68% | 8764.79 | 585 / 861 | 0% | 0 | 0 / 0 |
liver | 23% | 2201.54 | 51 / 226 | 36% | 11.24 | 146 / 406 |
muscle | 29% | 1423.59 | 232 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 24% | 7.54 | 7 / 29 |
tonsil | 0% | 0 | 0 / 0 | 18% | 2.00 | 8 / 45 |
peripheral blood | 0% | 3.47 | 1 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0061870 | Biological process | positive regulation of hepatic stellate cell migration |
GO_1900143 | Biological process | positive regulation of oligodendrocyte apoptotic process |
GO_0050804 | Biological process | modulation of chemical synaptic transmission |
GO_0051770 | Biological process | positive regulation of nitric-oxide synthase biosynthetic process |
GO_0051602 | Biological process | response to electrical stimulus |
GO_0043116 | Biological process | negative regulation of vascular permeability |
GO_0007165 | Biological process | signal transduction |
GO_0090036 | Biological process | regulation of protein kinase C signaling |
GO_0071347 | Biological process | cellular response to interleukin-1 |
GO_0010738 | Biological process | regulation of protein kinase A signaling |
GO_0071356 | Biological process | cellular response to tumor necrosis factor |
GO_0007186 | Biological process | G protein-coupled receptor signaling pathway |
GO_0010739 | Biological process | positive regulation of protein kinase A signaling |
GO_0007193 | Biological process | adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway |
GO_0070374 | Biological process | positive regulation of ERK1 and ERK2 cascade |
GO_0032760 | Biological process | positive regulation of tumor necrosis factor production |
GO_0035733 | Biological process | hepatic stellate cell activation |
GO_0032496 | Biological process | response to lipopolysaccharide |
GO_0005856 | Cellular component | cytoskeleton |
GO_0098685 | Cellular component | Schaffer collateral - CA1 synapse |
GO_0005886 | Cellular component | plasma membrane |
GO_0043025 | Cellular component | neuronal cell body |
GO_0005925 | Cellular component | focal adhesion |
GO_0005829 | Cellular component | cytosol |
GO_0005938 | Cellular component | cell cortex |
GO_0005737 | Cellular component | cytoplasm |
GO_0008179 | Molecular function | adenylate cyclase binding |
GO_0005516 | Molecular function | calmodulin binding |
GO_0051018 | Molecular function | protein kinase A binding |
GO_0005515 | Molecular function | protein binding |
Gene name | AKAP12 |
Protein name | AKAP12 protein A-kinase anchor protein 12 (AKAP-12) (A-kinase anchor protein 250 kDa) (AKAP 250) (Gravin) (Myasthenia gravis autoantigen) |
Synonyms | AKAP250 |
Description | FUNCTION: Anchoring protein that mediates the subcellular compartmentation of protein kinase A (PKA) and protein kinase C (PKC). |
Accessions | Q02952 Q6NSG9 ENST00000359755.5 [Q02952-3] ENST00000402676.7 [Q02952-1] ENST00000253332.5 [Q02952-1] Q86TJ9 ENST00000354675.10 [Q02952-2] |