Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| plasmacytoid dendritic cell | 11 studies | 37% ± 10% | |
| B cell | 8 studies | 23% ± 6% | |
| regulatory T cell | 8 studies | 20% ± 3% | |
| conventional dendritic cell | 6 studies | 28% ± 12% | |
| non-classical monocyte | 6 studies | 20% ± 6% | |
| classical monocyte | 5 studies | 19% ± 2% | |
| memory B cell | 5 studies | 20% ± 3% | |
| CD8-positive, alpha-beta T cell | 5 studies | 18% ± 5% | |
| hematopoietic precursor cell | 4 studies | 25% ± 9% | |
| epithelial cell | 4 studies | 29% ± 12% | |
| CD16-negative, CD56-bright natural killer cell, human | 4 studies | 22% ± 4% | |
| natural killer cell | 4 studies | 24% ± 3% | |
| effector CD8-positive, alpha-beta T cell | 4 studies | 17% ± 1% | |
| dendritic cell | 4 studies | 32% ± 15% | |
| naive B cell | 4 studies | 20% ± 2% | |
| naive thymus-derived CD8-positive, alpha-beta T cell | 3 studies | 19% ± 2% | |
| precursor B cell | 3 studies | 21% ± 4% | |
| immature B cell | 3 studies | 21% ± 5% | |
| endothelial cell | 3 studies | 24% ± 8% | |
| effector CD4-positive, alpha-beta T cell | 3 studies | 20% ± 3% | |
| hematopoietic stem cell | 3 studies | 22% ± 2% | |
| CD4-positive, alpha-beta memory T cell | 3 studies | 17% ± 2% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| peripheral blood | 3 studies | 18% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| esophagus | 100% | 2306.64 | 1445 / 1445 | 100% | 66.91 | 183 / 183 |
| ovary | 100% | 1732.79 | 180 / 180 | 100% | 116.72 | 430 / 430 |
| skin | 100% | 2789.41 | 1808 / 1809 | 100% | 131.73 | 472 / 472 |
| brain | 100% | 2725.62 | 2639 / 2642 | 100% | 102.99 | 705 / 705 |
| thymus | 100% | 2344.47 | 653 / 653 | 100% | 97.59 | 604 / 605 |
| uterus | 100% | 2152.18 | 170 / 170 | 100% | 96.33 | 458 / 459 |
| kidney | 100% | 1922.85 | 89 / 89 | 100% | 61.87 | 898 / 901 |
| intestine | 100% | 2402.10 | 966 / 966 | 100% | 69.99 | 525 / 527 |
| prostate | 100% | 2194.66 | 245 / 245 | 99% | 90.75 | 499 / 502 |
| pancreas | 99% | 1395.66 | 326 / 328 | 100% | 64.13 | 178 / 178 |
| stomach | 100% | 1961.18 | 359 / 359 | 99% | 69.29 | 284 / 286 |
| breast | 100% | 1985.15 | 459 / 459 | 99% | 84.51 | 1106 / 1118 |
| adrenal gland | 100% | 2122.88 | 258 / 258 | 99% | 60.29 | 227 / 230 |
| liver | 99% | 968.88 | 223 / 226 | 100% | 56.11 | 406 / 406 |
| lung | 99% | 1833.69 | 575 / 578 | 99% | 71.09 | 1145 / 1155 |
| bladder | 100% | 2216.05 | 21 / 21 | 98% | 72.73 | 496 / 504 |
| adipose | 100% | 1921.91 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 100% | 132.21 | 80 / 80 |
| lymph node | 0% | 0 | 0 / 0 | 100% | 161.59 | 29 / 29 |
| muscle | 100% | 3818.15 | 803 / 803 | 0% | 0 | 0 / 0 |
| peripheral blood | 100% | 3260.85 | 929 / 929 | 0% | 0 | 0 / 0 |
| spleen | 100% | 2770.34 | 241 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 86.71 | 45 / 45 |
| ureter | 0% | 0 | 0 / 0 | 100% | 56.56 | 1 / 1 |
| blood vessel | 100% | 2100.28 | 1332 / 1335 | 0% | 0 | 0 / 0 |
| heart | 98% | 2158.84 | 848 / 861 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0051607 | Biological process | defense response to virus |
| GO_0006511 | Biological process | ubiquitin-dependent protein catabolic process |
| GO_0045087 | Biological process | innate immune response |
| GO_0005829 | Cellular component | cytosol |
| GO_0005737 | Cellular component | cytoplasm |
| GO_0031593 | Molecular function | polyubiquitin modification-dependent protein binding |
| GO_0005515 | Molecular function | protein binding |
| GO_0060090 | Molecular function | molecular adaptor activity |
| Gene name | UBL7 |
| Protein name | Ubiquitin-like protein 7 (Bone marrow stromal cell ubiquitin-like protein) (BMSC-UbP) (Ubiquitin-like protein SB132) Ubiquitin like 7 |
| Synonyms | SB132 BMSCUBP |
| Description | FUNCTION: Interferon-stimulated protein that positively regulates RNA virus-triggered innate immune signaling. Mechanistically, promotes 'Lys-27'-linked polyubiquitination of MAVS through TRIM21 leading to enhanced the IFN signaling pathway. . |
| Accessions | ENST00000673120.1 ENST00000565494.5 ENST00000566365.5 H3BSQ2 ENST00000673073.1 ENST00000565130.5 H3BUV9 ENST00000563081.1 H3BSE0 Q96S82 ENST00000565335.5 ENST00000673153.1 H3BV23 ENST00000673461.1 ENST00000567435.5 ENST00000564488.5 ENST00000673054.1 ENST00000361351.8 ENST00000395081.7 |