Name | Number of supported studies | Average coverage | |
---|---|---|---|
ciliated cell | 19 studies | 33% ± 14% | |
endothelial cell | 18 studies | 26% ± 10% | |
astrocyte | 17 studies | 31% ± 13% | |
macrophage | 15 studies | 24% ± 7% | |
oligodendrocyte | 14 studies | 40% ± 12% | |
fibroblast | 14 studies | 24% ± 5% | |
type I pneumocyte | 12 studies | 40% ± 13% | |
glutamatergic neuron | 12 studies | 33% ± 20% | |
oligodendrocyte precursor cell | 12 studies | 34% ± 15% | |
microglial cell | 11 studies | 36% ± 12% | |
GABAergic neuron | 10 studies | 37% ± 19% | |
epithelial cell | 10 studies | 36% ± 18% | |
retinal rod cell | 7 studies | 23% ± 5% | |
type II pneumocyte | 6 studies | 20% ± 4% | |
neuron | 6 studies | 34% ± 14% | |
pericyte | 6 studies | 19% ± 3% | |
interneuron | 6 studies | 43% ± 22% | |
regulatory T cell | 6 studies | 18% ± 2% | |
basal cell | 6 studies | 30% ± 10% | |
retinal cone cell | 6 studies | 33% ± 11% | |
monocyte | 6 studies | 22% ± 4% | |
endothelial cell of lymphatic vessel | 6 studies | 19% ± 4% | |
T cell | 5 studies | 18% ± 3% | |
classical monocyte | 5 studies | 24% ± 8% | |
non-classical monocyte | 5 studies | 24% ± 9% | |
conventional dendritic cell | 5 studies | 25% ± 7% | |
retinal bipolar neuron | 5 studies | 40% ± 13% | |
myeloid cell | 5 studies | 25% ± 9% | |
club cell | 5 studies | 29% ± 11% | |
amacrine cell | 5 studies | 33% ± 10% | |
squamous epithelial cell | 4 studies | 47% ± 19% | |
CD4-positive, alpha-beta T cell | 4 studies | 18% ± 1% | |
granule cell | 4 studies | 21% ± 1% | |
retinal ganglion cell | 4 studies | 37% ± 23% | |
connective tissue cell | 4 studies | 21% ± 4% | |
retina horizontal cell | 4 studies | 26% ± 4% | |
smooth muscle cell | 4 studies | 18% ± 1% | |
Mueller cell | 4 studies | 38% ± 9% | |
CD8-positive, alpha-beta T cell | 4 studies | 18% ± 2% | |
gamma-delta T cell | 4 studies | 18% ± 2% | |
dendritic cell | 4 studies | 28% ± 13% | |
goblet cell | 4 studies | 27% ± 15% | |
renal alpha-intercalated cell | 4 studies | 34% ± 6% | |
natural killer cell | 3 studies | 17% ± 1% | |
pancreatic D cell | 3 studies | 31% ± 21% | |
type B pancreatic cell | 3 studies | 45% ± 22% | |
leukocyte | 3 studies | 30% ± 8% | |
naive thymus-derived CD8-positive, alpha-beta T cell | 3 studies | 17% ± 1% | |
mononuclear phagocyte | 3 studies | 20% ± 4% | |
B cell | 3 studies | 16% ± 1% | |
GABAergic interneuron | 3 studies | 27% ± 2% | |
retinal pigment epithelial cell | 3 studies | 33% ± 12% | |
lymphocyte | 3 studies | 27% ± 8% | |
OFF-bipolar cell | 3 studies | 31% ± 10% | |
ON-bipolar cell | 3 studies | 36% ± 11% | |
rod bipolar cell | 3 studies | 63% ± 2% | |
CD8-positive, alpha-beta memory T cell | 3 studies | 20% ± 3% | |
mature NK T cell | 3 studies | 18% ± 2% | |
pancreatic A cell | 3 studies | 44% ± 11% | |
ependymal cell | 3 studies | 55% ± 11% | |
adipocyte | 3 studies | 17% ± 0% | |
hepatocyte | 3 studies | 40% ± 10% | |
renal principal cell | 3 studies | 19% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 7380.55 | 2642 / 2642 | 100% | 148.85 | 703 / 705 |
skin | 100% | 3395.79 | 1805 / 1809 | 99% | 180.67 | 466 / 472 |
thymus | 100% | 4195.29 | 653 / 653 | 98% | 90.51 | 595 / 605 |
prostate | 100% | 2988.89 | 244 / 245 | 99% | 54.35 | 495 / 502 |
pancreas | 100% | 3316.12 | 327 / 328 | 98% | 56.19 | 175 / 178 |
esophagus | 100% | 4331.58 | 1444 / 1445 | 97% | 47.88 | 178 / 183 |
breast | 100% | 3646.90 | 459 / 459 | 97% | 64.65 | 1085 / 1118 |
stomach | 100% | 6371.24 | 359 / 359 | 97% | 49.00 | 277 / 286 |
lung | 99% | 4353.05 | 575 / 578 | 97% | 45.09 | 1120 / 1155 |
intestine | 100% | 3591.53 | 966 / 966 | 96% | 48.46 | 505 / 527 |
kidney | 100% | 2796.42 | 89 / 89 | 95% | 55.76 | 852 / 901 |
adrenal gland | 100% | 2400.28 | 257 / 258 | 93% | 54.00 | 214 / 230 |
bladder | 100% | 3578.86 | 21 / 21 | 91% | 38.56 | 459 / 504 |
ovary | 100% | 3580.89 | 180 / 180 | 89% | 26.10 | 382 / 430 |
uterus | 100% | 6020.71 | 170 / 170 | 88% | 32.87 | 405 / 459 |
liver | 100% | 2456.80 | 225 / 226 | 84% | 29.17 | 343 / 406 |
adipose | 100% | 3732.58 | 1204 / 1204 | 0% | 0 | 0 / 0 |
muscle | 100% | 2976.10 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 2248.98 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 35.28 | 1 / 1 |
blood vessel | 100% | 3566.18 | 1334 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 99.32 | 79 / 80 |
tonsil | 0% | 0 | 0 / 0 | 93% | 28.36 | 42 / 45 |
heart | 91% | 1713.44 | 787 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 70% | 1339.76 | 650 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 59% | 18.09 | 17 / 29 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005886 | Cellular component | plasma membrane |
GO_0005515 | Molecular function | protein binding |
Gene name | UBL3 |
Protein name | Ubiquitin-like protein 3 (Membrane-anchored ubiquitin-fold protein) (HsMUB) (MUB) (Protein HCG-1) |
Synonyms | PNSC1 |
Description | |
Accessions | ENST00000380680.5 O95164 |