TSR2 report

Query

Invalid input gene. Please select from the suggestions.

I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
natural killer cell	11 studies	20% ± 4%	Explore
B cell	9 studies	20% ± 5%	Explore
CD16-positive, CD56-dim natural killer cell, human	9 studies	20% ± 4%	Explore
naive B cell	8 studies	18% ± 2%	Explore
CD16-negative, CD56-bright natural killer cell, human	8 studies	18% ± 2%	Explore
gamma-delta T cell	8 studies	20% ± 8%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	7 studies	19% ± 3%	Explore
regulatory T cell	7 studies	19% ± 3%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	6 studies	20% ± 3%	Explore
CD4-positive, alpha-beta T cell	6 studies	21% ± 5%	Explore
CD8-positive, alpha-beta T cell	6 studies	21% ± 4%	Explore
endothelial cell	6 studies	27% ± 8%	Explore
effector memory CD8-positive, alpha-beta T cell	5 studies	22% ± 4%	Explore
fibroblast	5 studies	23% ± 6%	Explore
epithelial cell	5 studies	32% ± 13%	Explore
memory B cell	5 studies	18% ± 1%	Explore
mature NK T cell	4 studies	18% ± 2%	Explore
CD8-positive, alpha-beta memory T cell	4 studies	19% ± 2%	Explore
mucosal invariant T cell	4 studies	18% ± 2%	Explore
non-classical monocyte	3 studies	24% ± 6%	Explore
retinal ganglion cell	3 studies	48% ± 27%	Explore
pericyte	3 studies	17% ± 1%	Explore
smooth muscle cell	3 studies	19% ± 1%	Explore
amacrine cell	3 studies	37% ± 10%	Explore
retina horizontal cell	3 studies	30% ± 9%	Explore
ciliated cell	3 studies	26% ± 4%	Explore
effector memory CD4-positive, alpha-beta T cell	3 studies	22% ± 9%	Explore
mast cell	3 studies	20% ± 5%	Explore
T cell	3 studies	16% ± 1%	Explore
plasmacytoid dendritic cell	3 studies	18% ± 3%	Explore
CD4-positive, alpha-beta memory T cell	3 studies	17% ± 2%	Explore
double negative thymocyte	3 studies	25% ± 6%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
peripheral blood	7 studies	18% ± 4%	Explore
eye	5 studies	24% ± 10%	Explore
lung	4 studies	22% ± 7%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
adrenal gland	100%	3054.45	258 / 258	100%	82.29	230 / 230
brain	100%	6393.71	2642 / 2642	100%	68.59	705 / 705
thymus	100%	3113.31	653 / 653	100%	74.31	605 / 605
uterus	100%	2697.25	170 / 170	100%	54.46	459 / 459
skin	100%	2593.35	1808 / 1809	100%	47.04	472 / 472
kidney	100%	2654.73	89 / 89	100%	43.62	900 / 901
intestine	100%	2580.44	966 / 966	100%	42.44	526 / 527
bladder	100%	2583.62	21 / 21	100%	48.81	503 / 504
prostate	100%	2449.71	245 / 245	100%	55.22	501 / 502
ovary	100%	2325.91	180 / 180	100%	27.56	429 / 430
stomach	100%	2143.87	359 / 359	100%	36.11	285 / 286
breast	100%	2606.58	459 / 459	100%	55.68	1113 / 1118
lung	100%	2197.39	576 / 578	100%	40.83	1152 / 1155
liver	100%	1336.50	225 / 226	100%	31.18	405 / 406
esophagus	100%	2529.76	1444 / 1445	99%	22.57	181 / 183
pancreas	97%	1140.93	318 / 328	100%	42.90	178 / 178
adipose	100%	2390.19	1204 / 1204	0%	0	0 / 0
blood vessel	100%	3437.01	1335 / 1335	0%	0	0 / 0
eye	0%	0	0 / 0	100%	49.31	80 / 80
lymph node	0%	0	0 / 0	100%	54.63	29 / 29
spleen	100%	2249.91	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	47.40	45 / 45
ureter	0%	0	0 / 0	100%	35.87	1 / 1
muscle	100%	2029.76	799 / 803	0%	0	0 / 0
heart	96%	1975.73	830 / 861	0%	0	0 / 0
peripheral blood	79%	1223.45	734 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0